Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brca1P48754 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brca1P48754 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Brca1P48754 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Brca1P48754 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.77■□□□□ 0.44
Brca1P48754 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brca1P48754 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.77■□□□□ 0.43
Brca1P48754 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Brca1P48754 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Brca1P48754 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Brca1P48754 Gm25287-201ENSMUST00000103846 110 ntBASIC17.77■□□□□ 0.43
Brca1P48754 Gm22918-201ENSMUST00000103855 110 ntBASIC17.77■□□□□ 0.43
Brca1P48754 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.77■□□□□ 0.43
Brca1P48754 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Brca1P48754 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Brca1P48754 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Brca1P48754 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Brca1P48754 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.77■□□□□ 0.43
Brca1P48754 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Brca1P48754 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Brca1P48754 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.76■□□□□ 0.43
Brca1P48754 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Brca1P48754 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.76■□□□□ 0.43
Brca1P48754 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca1P48754 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca1P48754 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.75■□□□□ 0.43
Brca1P48754 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.75■□□□□ 0.43
Brca1P48754 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.75■□□□□ 0.43
Brca1P48754 Gm2423-201ENSMUST00000074863 733 ntBASIC17.75■□□□□ 0.43
Brca1P48754 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca1P48754 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca1P48754 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca1P48754 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca1P48754 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca1P48754 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca1P48754 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca1P48754 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Brca1P48754 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca1P48754 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.75■□□□□ 0.43
Brca1P48754 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Brca1P48754 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.75■□□□□ 0.43
Brca1P48754 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.75■□□□□ 0.43
Brca1P48754 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.75■□□□□ 0.43
Brca1P48754 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca1P48754 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.75■□□□□ 0.43
Brca1P48754 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.74■□□□□ 0.43
Brca1P48754 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.74■□□□□ 0.43
Brca1P48754 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 Gm9385-201ENSMUST00000117563 472 ntBASIC17.74■□□□□ 0.43
Brca1P48754 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
Brca1P48754 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Brca1P48754 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.74■□□□□ 0.43
Brca1P48754 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.74■□□□□ 0.43
Brca1P48754 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca1P48754 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brca1P48754 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Brca1P48754 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Brca1P48754 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.73■□□□□ 0.43
Brca1P48754 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Brca1P48754 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.73■□□□□ 0.43
Brca1P48754 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.73■□□□□ 0.43
Brca1P48754 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brca1P48754 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brca1P48754 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brca1P48754 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brca1P48754 Haglr-201ENSMUST00000100000 2085 ntBASIC17.73■□□□□ 0.43
Brca1P48754 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Brca1P48754 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brca1P48754 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brca1P48754 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brca1P48754 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.72■□□□□ 0.43
Brca1P48754 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Brca1P48754 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms