Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HttP42859 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HttP42859 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HttP42859 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HttP42859 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.89■□□□□ 0.29
HttP42859 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HttP42859 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.88■□□□□ 0.29
HttP42859 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
HttP42859 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HttP42859 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Gm12008-201ENSMUST00000117791 755 ntBASIC16.88■□□□□ 0.29
HttP42859 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.88■□□□□ 0.29
HttP42859 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.88■□□□□ 0.29
HttP42859 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.88■□□□□ 0.29
HttP42859 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HttP42859 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HttP42859 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HttP42859 Gm11478-201ENSMUST00000117851 599 ntBASIC16.87■□□□□ 0.29
HttP42859 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HttP42859 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HttP42859 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.87■□□□□ 0.29
HttP42859 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HttP42859 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
HttP42859 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
HttP42859 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 AY702102-202ENSMUST00000194651 1173 ntBASIC16.86■□□□□ 0.29
HttP42859 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.86■□□□□ 0.29
HttP42859 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HttP42859 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HttP42859 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.85■□□□□ 0.29
HttP42859 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.85■□□□□ 0.29
HttP42859 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HttP42859 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Gm28631-201ENSMUST00000190740 334 ntBASIC16.85■□□□□ 0.29
HttP42859 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.85■□□□□ 0.29
HttP42859 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Gm6888-201ENSMUST00000221983 706 ntBASIC16.85■□□□□ 0.29
HttP42859 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HttP42859 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.85■□□□□ 0.29
HttP42859 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.85■□□□□ 0.29
HttP42859 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HttP42859 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.84■□□□□ 0.29
HttP42859 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms