Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.35■□□□□ 0.21
Mmp13P33435 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp13P33435 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp13P33435 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp13P33435 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp13P33435 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp13P33435 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp13P33435 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Mmp13P33435 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Mmp13P33435 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp13P33435 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp13P33435 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp13P33435 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp13P33435 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp13P33435 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Mmp13P33435 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Mmp13P33435 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Mmp13P33435 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp13P33435 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp13P33435 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.33■□□□□ 0.21
Mmp13P33435 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.33■□□□□ 0.2
Mmp13P33435 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.33■□□□□ 0.2
Mmp13P33435 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.33■□□□□ 0.2
Mmp13P33435 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Mmp13P33435 Gm33142-201ENSMUST00000193913 867 ntBASIC16.33■□□□□ 0.2
Mmp13P33435 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Mmp13P33435 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp13P33435 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.33■□□□□ 0.2
Mmp13P33435 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp13P33435 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp13P33435 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp13P33435 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp13P33435 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Mmp13P33435 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.32■□□□□ 0.2
Mmp13P33435 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.32■□□□□ 0.2
Mmp13P33435 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.32■□□□□ 0.2
Mmp13P33435 Gm37722-201ENSMUST00000193757 208 ntBASIC16.32■□□□□ 0.2
Mmp13P33435 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp13P33435 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp13P33435 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp13P33435 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp13P33435 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp13P33435 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp13P33435 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp13P33435 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.31■□□□□ 0.2
Mmp13P33435 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.31■□□□□ 0.2
Mmp13P33435 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.31■□□□□ 0.2
Mmp13P33435 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Mmp13P33435 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Gm14859-201ENSMUST00000117752 357 ntBASIC16.31■□□□□ 0.2
Mmp13P33435 Gm21362-201ENSMUST00000194272 928 ntBASIC16.31■□□□□ 0.2
Mmp13P33435 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.31■□□□□ 0.2
Mmp13P33435 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Mmp13P33435 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms