Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rom1P32958 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rom1P32958 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rom1P32958 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rom1P32958 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rom1P32958 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.64□□□□□ -0.39
Rom1P32958 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Rom1P32958 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rom1P32958 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.64□□□□□ -0.39
Rom1P32958 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.64□□□□□ -0.39
Rom1P32958 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.64□□□□□ -0.39
Rom1P32958 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.64□□□□□ -0.39
Rom1P32958 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.64□□□□□ -0.39
Rom1P32958 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rom1P32958 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.63□□□□□ -0.39
Rom1P32958 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.63□□□□□ -0.39
Rom1P32958 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rom1P32958 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rom1P32958 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Rom1P32958 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.63□□□□□ -0.39
Rom1P32958 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.63□□□□□ -0.39
Rom1P32958 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Rom1P32958 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.63□□□□□ -0.39
Rom1P32958 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rom1P32958 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rom1P32958 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.62□□□□□ -0.39
Rom1P32958 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rom1P32958 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rom1P32958 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rom1P32958 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Rom1P32958 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rom1P32958 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.61□□□□□ -0.39
Rom1P32958 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rom1P32958 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms