Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Slc6a11P31650 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Slc6a11P31650 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Slc6a11P31650 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Slc6a11P31650 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Slc6a11P31650 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a11P31650 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Slc6a11P31650 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc6a11P31650 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Slc6a11P31650 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.13■□□□□ 0.01
Slc6a11P31650 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Slc6a11P31650 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Slc6a11P31650 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc6a11P31650 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.13■□□□□ 0.01
Slc6a11P31650 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a11P31650 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Slc6a11P31650 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Slc6a11P31650 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Slc6a11P31650 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Gm11355-201ENSMUST00000121120 306 ntBASIC15.12■□□□□ 0.01
Slc6a11P31650 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Slc6a11P31650 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Gm36967-201ENSMUST00000193814 266 ntBASIC15.12■□□□□ 0.01
Slc6a11P31650 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Slc6a11P31650 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Slc6a11P31650 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Slc6a11P31650 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.12■□□□□ 0.01
Slc6a11P31650 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a11P31650 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Slc6a11P31650 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.11■□□□□ 0.01
Slc6a11P31650 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Slc6a11P31650 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Slc6a11P31650 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.11■□□□□ 0.01
Slc6a11P31650 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Slc6a11P31650 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.11■□□□□ 0.01
Slc6a11P31650 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.11■□□□□ 0.01
Slc6a11P31650 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Gm18421-201ENSMUST00000204122 625 ntBASIC15.11■□□□□ 0.01
Slc6a11P31650 Gm7213-201ENSMUST00000215977 950 ntBASIC15.11■□□□□ 0.01
Slc6a11P31650 Gm7370-201ENSMUST00000219471 767 ntBASIC15.11■□□□□ 0.01
Slc6a11P31650 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Slc6a11P31650 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms