Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clk1P22518 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clk1P22518 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.83□□□□□ -0.03
Clk1P22518 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Clk1P22518 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clk1P22518 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clk1P22518 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clk1P22518 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Clk1P22518 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clk1P22518 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clk1P22518 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Clk1P22518 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Clk1P22518 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Clk1P22518 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Clk1P22518 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.83□□□□□ -0.04
Clk1P22518 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Clk1P22518 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.83□□□□□ -0.04
Clk1P22518 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.83□□□□□ -0.04
Clk1P22518 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.83□□□□□ -0.04
Clk1P22518 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clk1P22518 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Clk1P22518 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.82□□□□□ -0.04
Clk1P22518 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.82□□□□□ -0.04
Clk1P22518 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Gm45328-201ENSMUST00000210942 917 ntBASIC14.82□□□□□ -0.04
Clk1P22518 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Clk1P22518 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.82□□□□□ -0.04
Clk1P22518 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Clk1P22518 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Clk1P22518 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.82□□□□□ -0.04
Clk1P22518 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.82□□□□□ -0.04
Clk1P22518 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Clk1P22518 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clk1P22518 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Clk1P22518 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.81□□□□□ -0.04
Clk1P22518 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.81□□□□□ -0.04
Clk1P22518 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.81□□□□□ -0.04
Clk1P22518 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Clk1P22518 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Clk1P22518 Mir770-201ENSMUST00000103252 94 ntBASIC14.81□□□□□ -0.04
Clk1P22518 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.81□□□□□ -0.04
Clk1P22518 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.81□□□□□ -0.04
Clk1P22518 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Clk1P22518 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clk1P22518 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Clk1P22518 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms