Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Kcna1P16388 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Kcna1P16388 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Kcna1P16388 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.06■□□□□ 0.48
Kcna1P16388 Gm8655-201ENSMUST00000221159 852 ntBASIC18.06■□□□□ 0.48
Kcna1P16388 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Kcna1P16388 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Kcna1P16388 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Kcna1P16388 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Kcna1P16388 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Kcna1P16388 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Kcna1P16388 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Kcna1P16388 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Kcna1P16388 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Kcna1P16388 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Kcna1P16388 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Gm4535-201ENSMUST00000182274 558 ntBASIC18.05■□□□□ 0.48
Kcna1P16388 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.05■□□□□ 0.48
Kcna1P16388 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Kcna1P16388 Mzt1-203ENSMUST00000227948 952 ntBASIC18.05■□□□□ 0.48
Kcna1P16388 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.05■□□□□ 0.48
Kcna1P16388 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Gm10355-201ENSMUST00000097146 517 ntBASIC18.05■□□□□ 0.48
Kcna1P16388 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Kcna1P16388 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Kcna1P16388 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Kcna1P16388 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Kcna1P16388 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.04■□□□□ 0.48
Kcna1P16388 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.04■□□□□ 0.48
Kcna1P16388 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Kcna1P16388 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Kcna1P16388 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.04■□□□□ 0.48
Kcna1P16388 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Kcna1P16388 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.03■□□□□ 0.48
Kcna1P16388 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.03■□□□□ 0.48
Kcna1P16388 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.03■□□□□ 0.48
Kcna1P16388 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Kcna1P16388 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.03■□□□□ 0.48
Kcna1P16388 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.03■□□□□ 0.48
Kcna1P16388 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Kcna1P16388 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Kcna1P16388 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.03■□□□□ 0.48
Kcna1P16388 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.03■□□□□ 0.48
Kcna1P16388 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Kcna1P16388 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Kcna1P16388 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Kcna1P16388 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Kcna1P16388 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.02■□□□□ 0.48
Kcna1P16388 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Kcna1P16388 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Kcna1P16388 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Kcna1P16388 Gm6257-201ENSMUST00000163864 910 ntBASIC18.02■□□□□ 0.48
Kcna1P16388 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Kcna1P16388 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
Kcna1P16388 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Kcna1P16388 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
Kcna1P16388 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Kcna1P16388 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Kcna1P16388 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Kcna1P16388 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms