Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccl3P10855 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccl3P10855 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccl3P10855 Gm6257-201ENSMUST00000163864 910 ntBASIC14.04□□□□□ -0.16
Ccl3P10855 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccl3P10855 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccl3P10855 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ccl3P10855 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccl3P10855 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccl3P10855 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccl3P10855 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccl3P10855 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccl3P10855 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl3P10855 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl3P10855 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl3P10855 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl3P10855 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl3P10855 Gm13597-201ENSMUST00000121239 375 ntBASIC14.03□□□□□ -0.16
Ccl3P10855 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.03□□□□□ -0.16
Ccl3P10855 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl3P10855 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl3P10855 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl3P10855 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl3P10855 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl3P10855 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl3P10855 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl3P10855 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ccl3P10855 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl3P10855 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl3P10855 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl3P10855 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccl3P10855 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl3P10855 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl3P10855 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl3P10855 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl3P10855 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccl3P10855 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ccl3P10855 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl3P10855 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl3P10855 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl3P10855 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Ccl3P10855 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl3P10855 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl3P10855 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.02□□□□□ -0.17
Ccl3P10855 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl3P10855 Gm17968-201ENSMUST00000194902 784 ntBASIC14.02□□□□□ -0.17
Ccl3P10855 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl3P10855 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl3P10855 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ccl3P10855 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.02□□□□□ -0.17
Ccl3P10855 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.02□□□□□ -0.17
Ccl3P10855 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl3P10855 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccl3P10855 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccl3P10855 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl3P10855 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccl3P10855 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Ccl3P10855 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl3P10855 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccl3P10855 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccl3P10855 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl3P10855 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.01□□□□□ -0.17
Ccl3P10855 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccl3P10855 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl3P10855 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccl3P10855 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl3P10855 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.01□□□□□ -0.17
Ccl3P10855 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccl3P10855 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl3P10855 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccl3P10855 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms