Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm28196-201ENSMUST00000187719 640 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm44357-201ENSMUST00000195897 142 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm19658-201ENSMUST00000196231 138 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm44367-201ENSMUST00000196836 138 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm44350-201ENSMUST00000197197 138 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm44390-201ENSMUST00000197533 144 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm44313-201ENSMUST00000198018 138 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm44486-201ENSMUST00000198508 138 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm44314-201ENSMUST00000199263 138 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm44394-201ENSMUST00000199558 138 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm44484-201ENSMUST00000199873 138 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm44466-201ENSMUST00000200264 138 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Gm44359-201ENSMUST00000200671 138 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ly6c1P0CW02 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Gm4459-201ENSMUST00000118750 468 ntBASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ly6c1P0CW02 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Gm44882-201ENSMUST00000205702 802 ntBASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ly6c1P0CW02 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ly6c1P0CW02 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ly6c1P0CW02 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Ly6c1P0CW02 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.27□□□□□ -0.28
Ly6c1P0CW02 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ly6c1P0CW02 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.27□□□□□ -0.28
Ly6c1P0CW02 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ly6c1P0CW02 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ly6c1P0CW02 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ly6c1P0CW02 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ly6c1P0CW02 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.27□□□□□ -0.28
Ly6c1P0CW02 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ly6c1P0CW02 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ly6c1P0CW02 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ly6c1P0CW02 Gm13884-201ENSMUST00000118103 829 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms