Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ShdO88834 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.28■□□□□ 0.2
ShdO88834 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.28■□□□□ 0.2
ShdO88834 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShdO88834 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShdO88834 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
ShdO88834 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShdO88834 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShdO88834 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShdO88834 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ShdO88834 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShdO88834 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.27■□□□□ 0.2
ShdO88834 Gm9103-201ENSMUST00000119371 405 ntBASIC16.27■□□□□ 0.2
ShdO88834 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.27■□□□□ 0.2
ShdO88834 Gm17807-201ENSMUST00000186869 298 ntBASIC16.27■□□□□ 0.2
ShdO88834 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.27■□□□□ 0.2
ShdO88834 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShdO88834 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.27■□□□□ 0.2
ShdO88834 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShdO88834 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ShdO88834 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShdO88834 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShdO88834 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShdO88834 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.27■□□□□ 0.19
ShdO88834 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ShdO88834 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShdO88834 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
ShdO88834 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShdO88834 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShdO88834 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ShdO88834 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ShdO88834 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.26■□□□□ 0.19
ShdO88834 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.26■□□□□ 0.19
ShdO88834 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ShdO88834 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.26■□□□□ 0.19
ShdO88834 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.26■□□□□ 0.19
ShdO88834 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ShdO88834 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.26■□□□□ 0.19
ShdO88834 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShdO88834 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ShdO88834 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ShdO88834 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.25■□□□□ 0.19
ShdO88834 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.25■□□□□ 0.19
ShdO88834 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.25■□□□□ 0.19
ShdO88834 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.25■□□□□ 0.19
ShdO88834 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShdO88834 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ShdO88834 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ShdO88834 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ShdO88834 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ShdO88834 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShdO88834 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.24■□□□□ 0.19
ShdO88834 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ShdO88834 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.24■□□□□ 0.19
ShdO88834 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.24■□□□□ 0.19
ShdO88834 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ShdO88834 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.24■□□□□ 0.19
ShdO88834 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms