Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.22□□□□□ -0.29
SncaO55042 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SncaO55042 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SncaO55042 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Gm11336-201ENSMUST00000118168 334 ntBASIC13.21□□□□□ -0.29
SncaO55042 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.21□□□□□ -0.29
SncaO55042 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SncaO55042 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.21□□□□□ -0.29
SncaO55042 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.21□□□□□ -0.29
SncaO55042 Gm7213-201ENSMUST00000215977 950 ntBASIC13.21□□□□□ -0.29
SncaO55042 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
SncaO55042 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
SncaO55042 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.21□□□□□ -0.29
SncaO55042 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SncaO55042 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SncaO55042 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SncaO55042 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SncaO55042 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SncaO55042 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SncaO55042 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SncaO55042 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SncaO55042 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SncaO55042 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.2□□□□□ -0.3
SncaO55042 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SncaO55042 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SncaO55042 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SncaO55042 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SncaO55042 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.2□□□□□ -0.3
SncaO55042 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SncaO55042 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.2□□□□□ -0.3
SncaO55042 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.2□□□□□ -0.3
SncaO55042 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SncaO55042 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
SncaO55042 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SncaO55042 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SncaO55042 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SncaO55042 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.19□□□□□ -0.3
SncaO55042 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.19□□□□□ -0.3
SncaO55042 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SncaO55042 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.19□□□□□ -0.3
SncaO55042 Gm29707-201ENSMUST00000196325 491 ntBASIC13.19□□□□□ -0.3
SncaO55042 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.19□□□□□ -0.3
SncaO55042 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.19□□□□□ -0.3
SncaO55042 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms