Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.97■□□□□ 0.63
Smarce1O54941 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.97■□□□□ 0.63
Smarce1O54941 Gm37722-201ENSMUST00000193757 208 ntBASIC18.97■□□□□ 0.63
Smarce1O54941 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.97■□□□□ 0.63
Smarce1O54941 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Smarce1O54941 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Smarce1O54941 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.96■□□□□ 0.63
Smarce1O54941 Gm10052-201ENSMUST00000168019 960 ntBASIC18.96■□□□□ 0.63
Smarce1O54941 Gm7729-201ENSMUST00000050143 801 ntBASIC18.96■□□□□ 0.63
Smarce1O54941 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Smarce1O54941 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Smarce1O54941 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 App-207ENSMUST00000227737 2827 ntBASIC18.96■□□□□ 0.63
Smarce1O54941 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarce1O54941 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.95■□□□□ 0.62
Smarce1O54941 Gm44430-201ENSMUST00000203376 995 ntBASIC18.95■□□□□ 0.62
Smarce1O54941 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smarce1O54941 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.95■□□□□ 0.62
Smarce1O54941 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarce1O54941 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Smarce1O54941 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.95■□□□□ 0.62
Smarce1O54941 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Smarce1O54941 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.94■□□□□ 0.62
Smarce1O54941 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.94■□□□□ 0.62
Smarce1O54941 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Smarce1O54941 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.94■□□□□ 0.62
Smarce1O54941 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarce1O54941 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smarce1O54941 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.93■□□□□ 0.62
Smarce1O54941 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Smarce1O54941 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Smarce1O54941 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.93■□□□□ 0.62
Smarce1O54941 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.93■□□□□ 0.62
Smarce1O54941 Gm21559-201ENSMUST00000220638 855 ntBASIC18.93■□□□□ 0.62
Smarce1O54941 Gm8587-201ENSMUST00000076538 843 ntBASIC18.93■□□□□ 0.62
Smarce1O54941 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Smarce1O54941 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarce1O54941 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms