Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dkk1O54908 Gm43771-201ENSMUST00000202931 1578 ntBASIC14.12□□□□□ -0.15
Dkk1O54908 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dkk1O54908 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Dkk1O54908 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dkk1O54908 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Dkk1O54908 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Dkk1O54908 Gm22588-201ENSMUST00000157510 140 ntBASIC14.11□□□□□ -0.15
Dkk1O54908 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC14.11□□□□□ -0.15
Dkk1O54908 Gm37860-201ENSMUST00000195380 1034 ntBASIC14.11□□□□□ -0.15
Dkk1O54908 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Dkk1O54908 AC161426.1-201ENSMUST00000214137 286 ntBASIC14.11□□□□□ -0.15
Dkk1O54908 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Dkk1O54908 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Dkk1O54908 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Dkk1O54908 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Dkk1O54908 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dkk1O54908 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Dkk1O54908 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.1□□□□□ -0.15
Dkk1O54908 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Dkk1O54908 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Dkk1O54908 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.1□□□□□ -0.15
Dkk1O54908 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Dkk1O54908 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.1□□□□□ -0.15
Dkk1O54908 Gm6623-201ENSMUST00000173570 544 ntBASIC14.1□□□□□ -0.15
Dkk1O54908 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC14.1□□□□□ -0.15
Dkk1O54908 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC14.1□□□□□ -0.15
Dkk1O54908 AC116589.9-201ENSMUST00000221462 908 ntBASIC14.1□□□□□ -0.15
Dkk1O54908 AC154417.1-201ENSMUST00000223876 476 ntBASIC14.1□□□□□ -0.15
Dkk1O54908 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.1□□□□□ -0.15
Dkk1O54908 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Dkk1O54908 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Dkk1O54908 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Dkk1O54908 Gm4806-201ENSMUST00000222704 1690 ntBASIC14.1□□□□□ -0.15
Dkk1O54908 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Dkk1O54908 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Dkk1O54908 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Dkk1O54908 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dkk1O54908 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Dkk1O54908 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.09□□□□□ -0.15
Dkk1O54908 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.09□□□□□ -0.15
Dkk1O54908 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Dkk1O54908 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Dkk1O54908 Gm3715-201ENSMUST00000172308 617 ntBASIC14.09□□□□□ -0.15
Dkk1O54908 Ap1g1-206ENSMUST00000179104 1096 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms