Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.48□□□□□ -0.41
Tnfsf11O35235 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Sybu-209ENSMUST00000228639 4113 ntBASIC12.48□□□□□ -0.41
Tnfsf11O35235 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf11O35235 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.47□□□□□ -0.41
Tnfsf11O35235 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Gm12441-201ENSMUST00000121806 588 ntBASIC12.47□□□□□ -0.41
Tnfsf11O35235 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Il3ra-202ENSMUST00000223589 738 ntBASIC12.47□□□□□ -0.41
Tnfsf11O35235 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.47□□□□□ -0.41
Tnfsf11O35235 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf11O35235 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.46□□□□□ -0.41
Tnfsf11O35235 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tnfsf11O35235 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.46□□□□□ -0.41
Tnfsf11O35235 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf11O35235 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.46□□□□□ -0.41
Tnfsf11O35235 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.46□□□□□ -0.41
Tnfsf11O35235 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.46□□□□□ -0.41
Tnfsf11O35235 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf11O35235 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfsf11O35235 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.46□□□□□ -0.42
Tnfsf11O35235 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfsf11O35235 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Tnfsf11O35235 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfsf11O35235 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfsf11O35235 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Tnfsf11O35235 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfsf11O35235 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms