Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Alx4O35137 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Alx4O35137 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.23□□□□□ -0.13
Alx4O35137 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx4O35137 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx4O35137 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.22□□□□□ -0.13
Alx4O35137 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx4O35137 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Alx4O35137 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.22□□□□□ -0.13
Alx4O35137 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.22□□□□□ -0.13
Alx4O35137 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.22□□□□□ -0.13
Alx4O35137 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.22□□□□□ -0.13
Alx4O35137 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.22□□□□□ -0.13
Alx4O35137 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.22□□□□□ -0.13
Alx4O35137 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx4O35137 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx4O35137 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Alx4O35137 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.22□□□□□ -0.13
Alx4O35137 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.22□□□□□ -0.13
Alx4O35137 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.22□□□□□ -0.13
Alx4O35137 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx4O35137 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx4O35137 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.22□□□□□ -0.13
Alx4O35137 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx4O35137 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx4O35137 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx4O35137 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Alx4O35137 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.22□□□□□ -0.13
Alx4O35137 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx4O35137 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.21□□□□□ -0.13
Alx4O35137 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Alx4O35137 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Alx4O35137 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.21□□□□□ -0.13
Alx4O35137 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.21□□□□□ -0.13
Alx4O35137 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx4O35137 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Alx4O35137 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Alx4O35137 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Alx4O35137 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Alx4O35137 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Alx4O35137 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Alx4O35137 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Alx4O35137 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.2□□□□□ -0.14
Alx4O35137 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.2□□□□□ -0.14
Alx4O35137 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Alx4O35137 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Alx4O35137 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Alx4O35137 Mir1668-201ENSMUST00000184114 107 ntBASIC14.2□□□□□ -0.14
Alx4O35137 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.2□□□□□ -0.14
Alx4O35137 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.2□□□□□ -0.14
Alx4O35137 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 BC037039-201ENSMUST00000192003 2205 ntBASIC14.2□□□□□ -0.14
Alx4O35137 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx4O35137 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms