Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc2O08811 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc2O08811 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc2O08811 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.31■□□□□ 0.2
Ercc2O08811 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc2O08811 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc2O08811 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.31■□□□□ 0.2
Ercc2O08811 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.31■□□□□ 0.2
Ercc2O08811 Gm18669-201ENSMUST00000216049 778 ntBASIC16.31■□□□□ 0.2
Ercc2O08811 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.31■□□□□ 0.2
Ercc2O08811 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.31■□□□□ 0.2
Ercc2O08811 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc2O08811 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc2O08811 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ercc2O08811 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ercc2O08811 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc2O08811 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc2O08811 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc2O08811 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Ercc2O08811 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ercc2O08811 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.3■□□□□ 0.2
Ercc2O08811 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Ercc2O08811 Gm15165-201ENSMUST00000118140 502 ntBASIC16.3■□□□□ 0.2
Ercc2O08811 Gm12895-201ENSMUST00000122214 226 ntBASIC16.3■□□□□ 0.2
Ercc2O08811 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.3■□□□□ 0.2
Ercc2O08811 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.3■□□□□ 0.2
Ercc2O08811 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Ercc2O08811 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ercc2O08811 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ercc2O08811 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ercc2O08811 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc2O08811 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ercc2O08811 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.29■□□□□ 0.2
Ercc2O08811 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.29■□□□□ 0.2
Ercc2O08811 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Gm15372-201ENSMUST00000120729 834 ntBASIC16.29■□□□□ 0.2
Ercc2O08811 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Gm25406-201ENSMUST00000157599 105 ntBASIC16.29■□□□□ 0.2
Ercc2O08811 Gm27867-201ENSMUST00000184778 125 ntBASIC16.29■□□□□ 0.2
Ercc2O08811 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.29■□□□□ 0.2
Ercc2O08811 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.29■□□□□ 0.2
Ercc2O08811 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.29■□□□□ 0.2
Ercc2O08811 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Dancr-204ENSMUST00000132389 2347 ntBASIC16.29■□□□□ 0.2
Ercc2O08811 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.29■□□□□ 0.2
Ercc2O08811 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc2O08811 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Ercc2O08811 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ercc2O08811 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.28■□□□□ 0.2
Ercc2O08811 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.28■□□□□ 0.2
Ercc2O08811 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.28■□□□□ 0.2
Ercc2O08811 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ercc2O08811 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc2O08811 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.27■□□□□ 0.2
Ercc2O08811 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ercc2O08811 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.27■□□□□ 0.2
Ercc2O08811 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms