Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 Gm7230-201ENSMUST00000173026 815 ntBASIC16.52■□□□□ 0.24
Ebf3O08791 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.52■□□□□ 0.24
Ebf3O08791 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.52■□□□□ 0.24
Ebf3O08791 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ebf3O08791 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Ebf3O08791 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ebf3O08791 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
Ebf3O08791 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ebf3O08791 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ebf3O08791 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ebf3O08791 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.52■□□□□ 0.23
Ebf3O08791 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ebf3O08791 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ebf3O08791 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ebf3O08791 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ebf3O08791 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ebf3O08791 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.51■□□□□ 0.23
Ebf3O08791 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Ebf3O08791 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.51■□□□□ 0.23
Ebf3O08791 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.51■□□□□ 0.23
Ebf3O08791 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ebf3O08791 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf3O08791 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Ebf3O08791 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Ebf3O08791 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.51■□□□□ 0.23
Ebf3O08791 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ebf3O08791 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.5■□□□□ 0.23
Ebf3O08791 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.5■□□□□ 0.23
Ebf3O08791 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.5■□□□□ 0.23
Ebf3O08791 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf3O08791 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ebf3O08791 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.49■□□□□ 0.23
Ebf3O08791 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.49■□□□□ 0.23
Ebf3O08791 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.49■□□□□ 0.23
Ebf3O08791 Gm11779-201ENSMUST00000118541 368 ntBASIC16.49■□□□□ 0.23
Ebf3O08791 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.49■□□□□ 0.23
Ebf3O08791 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.49■□□□□ 0.23
Ebf3O08791 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.49■□□□□ 0.23
Ebf3O08791 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Gm15590-201ENSMUST00000078419 552 ntBASIC16.49■□□□□ 0.23
Ebf3O08791 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.49■□□□□ 0.23
Ebf3O08791 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ebf3O08791 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms