Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11bO08712 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tnfrsf11bO08712 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tnfrsf11bO08712 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tnfrsf11bO08712 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tnfrsf11bO08712 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tnfrsf11bO08712 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Tnfrsf11bO08712 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Gm9013-201ENSMUST00000132939 882 ntBASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11bO08712 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Gm6623-201ENSMUST00000173570 544 ntBASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms