Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Ccdc141E9Q8Q6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc141E9Q8Q6 CT030684.1-201ENSMUST00000227292 914 ntBASIC23.8■■□□□ 1.4
Ccdc141E9Q8Q6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Ccdc141E9Q8Q6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc141E9Q8Q6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC23.8■■□□□ 1.4
Ccdc141E9Q8Q6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc141E9Q8Q6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc141E9Q8Q6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc141E9Q8Q6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 AC125206.2-201ENSMUST00000217454 574 ntBASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Gm8318-201ENSMUST00000182954 872 ntBASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Gm27437-201ENSMUST00000183429 107 ntBASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc141E9Q8Q6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Gm5745-201ENSMUST00000183748 313 ntBASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Gm43438-201ENSMUST00000198133 379 ntBASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Haglr-201ENSMUST00000100000 2085 ntBASIC23.78■■□□□ 1.4
Ccdc141E9Q8Q6 Grk6-207ENSMUST00000225925 2769 ntBASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Gm10154-201ENSMUST00000084445 354 ntBASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc141E9Q8Q6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc141E9Q8Q6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc141E9Q8Q6 Gm15693-201ENSMUST00000120470 637 ntBASIC23.76■■□□□ 1.39
Ccdc141E9Q8Q6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC23.76■■□□□ 1.39
Ccdc141E9Q8Q6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Ccdc141E9Q8Q6 Gm37277-201ENSMUST00000194052 1111 ntBASIC23.76■■□□□ 1.39
Ccdc141E9Q8Q6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC23.76■■□□□ 1.39
Ccdc141E9Q8Q6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc141E9Q8Q6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc141E9Q8Q6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc141E9Q8Q6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc141E9Q8Q6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Gm5866-201ENSMUST00000177881 973 ntBASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Gm5779-201ENSMUST00000218467 910 ntBASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc141E9Q8Q6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Gm13216-201ENSMUST00000117145 591 ntBASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Gm12151-201ENSMUST00000121374 290 ntBASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Gm27430-201ENSMUST00000184585 107 ntBASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Gm44333-201ENSMUST00000197168 107 ntBASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC23.74■■□□□ 1.39
Ccdc141E9Q8Q6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms