Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Gm6089-201ENSMUST00000197666 938 ntBASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb9E9Q5G2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Gm10060-201ENSMUST00000212002 111 ntBASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb9E9Q5G2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.71■□□□□ 0.58
Pcdhb9E9Q5G2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Gm18195-201ENSMUST00000207604 706 ntBASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb9E9Q5G2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Gm7230-201ENSMUST00000173026 815 ntBASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms