Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Gm15693-201ENSMUST00000120470 637 ntBASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 CT030684.1-201ENSMUST00000227292 914 ntBASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Hfm1D3Z4R1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Hfm1D3Z4R1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
Hfm1D3Z4R1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Hfm1D3Z4R1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hfm1D3Z4R1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
Hfm1D3Z4R1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hfm1D3Z4R1 Gm11453-201ENSMUST00000117318 1007 ntBASIC22.2■■□□□ 1.14
Hfm1D3Z4R1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hfm1D3Z4R1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Hfm1D3Z4R1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hfm1D3Z4R1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC22.2■■□□□ 1.14
Hfm1D3Z4R1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hfm1D3Z4R1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC22.2■■□□□ 1.14
Hfm1D3Z4R1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hfm1D3Z4R1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Grk6-207ENSMUST00000225925 2769 ntBASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Gm7286-201ENSMUST00000182691 1007 ntBASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Gm2272-201ENSMUST00000194903 582 ntBASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Gm5779-201ENSMUST00000218467 910 ntBASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hfm1D3Z4R1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Gm37277-201ENSMUST00000194052 1111 ntBASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 AC166341.4-201ENSMUST00000220625 123 ntBASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Gm43338-201ENSMUST00000198617 2223 ntBASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms