Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col6a4A2AX52 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.39□□□□□ -0.27
Col6a4A2AX52 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.39□□□□□ -0.27
Col6a4A2AX52 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Gm27300-201ENSMUST00000184085 97 ntBASIC13.38□□□□□ -0.27
Col6a4A2AX52 Gm27335-201ENSMUST00000184758 97 ntBASIC13.38□□□□□ -0.27
Col6a4A2AX52 Gm45167-201ENSMUST00000208007 322 ntBASIC13.38□□□□□ -0.27
Col6a4A2AX52 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.38□□□□□ -0.27
Col6a4A2AX52 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.38□□□□□ -0.27
Col6a4A2AX52 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.38□□□□□ -0.27
Col6a4A2AX52 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a4A2AX52 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a4A2AX52 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.36□□□□□ -0.27
Col6a4A2AX52 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.36□□□□□ -0.27
Col6a4A2AX52 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms