Protein–RNA interactions for Protein: A1L0T3

Ssc4d, Scavenger receptor cysteine-rich domain-containing group B protein, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc4dA1L0T3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssc4dA1L0T3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssc4dA1L0T3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssc4dA1L0T3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssc4dA1L0T3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssc4dA1L0T3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssc4dA1L0T3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssc4dA1L0T3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssc4dA1L0T3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssc4dA1L0T3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.33■□□□□ 0.05
Ssc4dA1L0T3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Gm5264-201ENSMUST00000190584 848 ntBASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssc4dA1L0T3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Gm15358-201ENSMUST00000119249 520 ntBASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Gm15467-201ENSMUST00000120582 445 ntBASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Gm5867-201ENSMUST00000063197 592 ntBASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssc4dA1L0T3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Gm12260-201ENSMUST00000122447 411 ntBASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Gm37935-201ENSMUST00000192012 982 ntBASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssc4dA1L0T3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssc4dA1L0T3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssc4dA1L0T3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssc4dA1L0T3 Gm11594-201ENSMUST00000122313 162 ntBASIC15.3■□□□□ 0.04
Ssc4dA1L0T3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.3■□□□□ 0.04
Ssc4dA1L0T3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssc4dA1L0T3 Gm9727-201ENSMUST00000161387 555 ntBASIC15.3■□□□□ 0.04
Ssc4dA1L0T3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ssc4dA1L0T3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ssc4dA1L0T3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssc4dA1L0T3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms