Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Gm2274-201ENSMUST00000184539 609 ntBASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Gm7213-201ENSMUST00000215977 950 ntBASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12d-1A0N8R0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12d-1A0N8R0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12d-1A0N8R0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12d-1A0N8R0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12d-1A0N8R0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Gm8520-201ENSMUST00000186517 868 ntBASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12d-1A0N8R0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav12d-1A0N8R0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12d-1A0N8R0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav12d-1A0N8R0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Trav12d-1A0N8R0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms