Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Gm11355-201ENSMUST00000121120 306 ntBASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Gm10052-201ENSMUST00000168019 960 ntBASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Gm7729-201ENSMUST00000050143 801 ntBASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ccdc112A0AUP1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Gm22697-201ENSMUST00000175194 63 ntBASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ccdc112A0AUP1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Gm15565-201ENSMUST00000118890 427 ntBASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc112A0AUP1 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc112A0AUP1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms