Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm7213-201ENSMUST00000215977 950 ntBASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm9013-201ENSMUST00000132939 882 ntBASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm6345-202ENSMUST00000180900 204 ntBASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhgb8A0A140LI48 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhgb8A0A140LI48 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms