Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Gm7889-201ENSMUST00000185591 958 ntBASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5580A0A0N4SVP8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Gm5580A0A0N4SVP8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm5580A0A0N4SVP8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm5580A0A0N4SVP8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm5580A0A0N4SVP8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5580A0A0N4SVP8 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Gm45058-201ENSMUST00000205810 766 ntBASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5580A0A0N4SVP8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Gm43799-201ENSMUST00000201845 579 ntBASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Gm9987-201ENSMUST00000069768 567 ntBASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5580A0A0N4SVP8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5580A0A0N4SVP8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5580A0A0N4SVP8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5580A0A0N4SVP8 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms