Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.94□□□□□ -0.5
Trav19A0A0B4J1K4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav19A0A0B4J1K4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav19A0A0B4J1K4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav19A0A0B4J1K4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Trav19A0A0B4J1K4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav19A0A0B4J1K4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav19A0A0B4J1K4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Gm11539-201ENSMUST00000119837 557 ntBASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav19A0A0B4J1K4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Gm18421-201ENSMUST00000204122 625 ntBASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Trav19A0A0B4J1K4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms