Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Rprl3-201ENSMUST00000157400 290 ntBASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Trav13-1A0A075B644 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-1A0A075B644 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Gm13216-201ENSMUST00000117145 591 ntBASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Gm43347-201ENSMUST00000200226 580 ntBASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms