Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Gm15794-201ENSMUST00000120182 631 ntBASIC14.17□□□□□ -0.14
Trav10A0A075B642 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav10A0A075B642 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10A0A075B642 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10A0A075B642 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10A0A075B642 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10A0A075B642 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.16□□□□□ -0.14
Trav10A0A075B642 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav10A0A075B642 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10A0A075B642 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav10A0A075B642 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav10A0A075B642 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.14□□□□□ -0.15
Trav10A0A075B642 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav10A0A075B642 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.14□□□□□ -0.15
Trav10A0A075B642 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav10A0A075B642 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.14□□□□□ -0.15
Trav10A0A075B642 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.14□□□□□ -0.15
Trav10A0A075B642 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.14□□□□□ -0.15
Trav10A0A075B642 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10A0A075B642 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms