Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16nA0A075B634 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav16nA0A075B634 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.08□□□□□ -0.47
Trav16nA0A075B634 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Gm7791-201ENSMUST00000219066 539 ntBASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16nA0A075B634 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Trmt13-210ENSMUST00000198454 880 ntBASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.07□□□□□ -0.48
Trav16nA0A075B634 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms