Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Gm15794-201ENSMUST00000120182 631 ntBASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav10nA0A075B622 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.16□□□□□ -0.14
Trav10nA0A075B622 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav10nA0A075B622 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav10nA0A075B622 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.14□□□□□ -0.15
Trav10nA0A075B622 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav10nA0A075B622 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms