Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-1A0A075B601 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Mir6982-201ENSMUST00000184354 68 ntBASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-1A0A075B601 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Gm27389-201ENSMUST00000183622 195 ntBASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Trav9-1A0A075B601 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.46□□□□□ -0.42
Trav9-1A0A075B601 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-1A0A075B601 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-1A0A075B601 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-1A0A075B601 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-1A0A075B601 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-1A0A075B601 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms