Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbv4A0A075B5I2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Gm27742-201ENSMUST00000184667 60 ntBASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv4A0A075B5I2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv4A0A075B5I2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv4A0A075B5I2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Trbv4A0A075B5I2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv4A0A075B5I2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv4A0A075B5I2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Mir3081-201ENSMUST00000175305 84 ntBASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms