Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 DLEU2_4.2-201ENST00000616613 58 ntBASIC-5.18□□□□□ -3.24
CCDC43Q96MW1 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-5.4□□□□□ -3.27
CCDC43Q96MW1 SNORD111B-201ENST00000408587 80 ntBASIC-5.45□□□□□ -3.28
CCDC43Q96MW1 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.47□□□□□ -3.29
CCDC43Q96MW1 RNU4-85P-201ENST00000364675 123 ntBASIC-5.52□□□□□ -3.29
CCDC43Q96MW1 U6.103-201ENST00000637085 61 ntBASIC-5.58□□□□□ -3.3
CCDC43Q96MW1 RNU6-627P-201ENST00000364032 102 ntBASIC-5.6□□□□□ -3.31
CCDC43Q96MW1 MTND4LP19-201ENST00000403051 166 ntBASIC-5.62□□□□□ -3.31
CCDC43Q96MW1 RNU6-485P-201ENST00000363475 107 ntBASIC-5.63□□□□□ -3.31
CCDC43Q96MW1 RNU6-1091P-201ENST00000363945 107 ntBASIC-5.68□□□□□ -3.32
CCDC43Q96MW1 RNU6-620P-201ENST00000384017 96 ntBASIC-5.69□□□□□ -3.32
CCDC43Q96MW1 RNA5SP449-201ENST00000516871 130 ntBASIC-5.71□□□□□ -3.32
CCDC43Q96MW1 Y_RNA.165-201ENST00000363721 102 ntBASIC-5.83□□□□□ -3.34
CCDC43Q96MW1 MIR363-201ENST00000384840 75 ntBASIC-5.87□□□□□ -3.35
CCDC43Q96MW1 RNU6-133P-201ENST00000383989 107 ntBASIC-6.05□□□□□ -3.38
CCDC43Q96MW1 RNU6-894P-201ENST00000517094 105 ntBASIC-6.11□□□□□ -3.39
CCDC43Q96MW1 Y_RNA.15-201ENST00000362420 102 ntBASIC-6.18□□□□□ -3.4
CCDC43Q96MW1 RNU6-724P-201ENST00000390958 105 ntBASIC-6.19□□□□□ -3.4
CCDC43Q96MW1 RNU4-37P-201ENST00000410214 84 ntBASIC-6.22□□□□□ -3.41
CCDC43Q96MW1 RNU6-916P-201ENST00000516088 109 ntBASIC-6.3□□□□□ -3.42
CCDC43Q96MW1 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-6.66□□□□□ -3.48
CCDC43Q96MW1 MIR548T-201ENST00000408369 74 ntBASIC-6.73□□□□□ -3.49
CCDC43Q96MW1 RNU6-892P-201ENST00000410335 99 ntBASIC-7.12□□□□□ -3.55
CCDC43Q96MW1 RNY4P19-201ENST00000362530 96 ntBASIC-7.81□□□□□ -3.66
Retrieved 24 of 98,524 protein–RNA pairs in 6 ms