Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 RNY4P13-201ENST00000384284 96 ntBASIC-5.74□□□□□ -3.33
HDDC3Q8N4P3 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-5.87□□□□□ -3.35
HDDC3Q8N4P3 MTND4LP19-201ENST00000403051 166 ntBASIC-5.94□□□□□ -3.36
HDDC3Q8N4P3 SNORD111B-201ENST00000408587 80 ntBASIC-6.02□□□□□ -3.37
HDDC3Q8N4P3 U6.103-201ENST00000637085 61 ntBASIC-6.06□□□□□ -3.38
HDDC3Q8N4P3 RNU6-627P-201ENST00000364032 102 ntBASIC-6.08□□□□□ -3.38
HDDC3Q8N4P3 RNU4-85P-201ENST00000364675 123 ntBASIC-6.09□□□□□ -3.38
HDDC3Q8N4P3 RNU6-1024P-201ENST00000384199 107 ntBASIC-6.12□□□□□ -3.39
HDDC3Q8N4P3 RNU6-485P-201ENST00000363475 107 ntBASIC-6.24□□□□□ -3.41
HDDC3Q8N4P3 RNU6-620P-201ENST00000384017 96 ntBASIC-6.27□□□□□ -3.41
HDDC3Q8N4P3 RNA5SP449-201ENST00000516871 130 ntBASIC-6.27□□□□□ -3.41
HDDC3Q8N4P3 RNU6-1091P-201ENST00000363945 107 ntBASIC-6.3□□□□□ -3.42
HDDC3Q8N4P3 Y_RNA.165-201ENST00000363721 102 ntBASIC-6.37□□□□□ -3.43
HDDC3Q8N4P3 RNU6-133P-201ENST00000383989 107 ntBASIC-6.61□□□□□ -3.47
HDDC3Q8N4P3 RNU4-37P-201ENST00000410214 84 ntBASIC-6.66□□□□□ -3.48
HDDC3Q8N4P3 MIR363-201ENST00000384840 75 ntBASIC-6.74□□□□□ -3.49
HDDC3Q8N4P3 RNU6-724P-201ENST00000390958 105 ntBASIC-6.75□□□□□ -3.49
HDDC3Q8N4P3 RNU6-894P-201ENST00000517094 105 ntBASIC-6.82□□□□□ -3.5
HDDC3Q8N4P3 RNU6-916P-201ENST00000516088 109 ntBASIC-6.94□□□□□ -3.52
HDDC3Q8N4P3 Y_RNA.15-201ENST00000362420 102 ntBASIC-7.04□□□□□ -3.54
HDDC3Q8N4P3 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-7.23□□□□□ -3.57
HDDC3Q8N4P3 MIR548T-201ENST00000408369 74 ntBASIC-7.53□□□□□ -3.61
HDDC3Q8N4P3 RNU6-892P-201ENST00000410335 99 ntBASIC-7.91□□□□□ -3.68
HDDC3Q8N4P3 RNY4P19-201ENST00000362530 96 ntBASIC-8.55□□□□□ -3.78
Retrieved 24 of 98,524 protein–RNA pairs in 4.5 ms