Protein–RNA interactions for Protein: P39880

CUX1, Homeobox protein cut-like 1, humanhuman

Predictions only

Length 1,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1P39880 RNU6-794P-201ENST00000517261 64 ntBASIC-6.72□□□□□ -3.49
CUX1P39880 Y_RNA.388-201ENST00000383919 113 ntBASIC-6.8□□□□□ -3.5
CUX1P39880 RNY4P29-201ENST00000410801 97 ntBASIC-6.81□□□□□ -3.5
CUX1P39880 MIR548M-201ENST00000408260 86 ntBASIC-6.84□□□□□ -3.5
CUX1P39880 MIR3910-1-201ENST00000580936 111 ntBASIC-6.9□□□□□ -3.51
CUX1P39880 AL606753.1-201ENST00000427435 87 ntBASIC-6.93□□□□□ -3.52
CUX1P39880 Y_RNA.685-201ENST00000516532 108 ntBASIC-7.03□□□□□ -3.54
CUX1P39880 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-7.18□□□□□ -3.56
CUX1P39880 AP001094.1-201ENST00000579805 193 ntBASIC-7.22□□□□□ -3.56
CUX1P39880 RNA5SP170-201ENST00000517150 101 ntBASIC-7.24□□□□□ -3.57
CUX1P39880 MTND4LP19-201ENST00000403051 166 ntBASIC-7.26□□□□□ -3.57
CUX1P39880 MIR1302-4-201ENST00000408701 150 ntBASIC-7.32□□□□□ -3.58
CUX1P39880 RNU6-1298P-201ENST00000362456 101 ntBASIC-7.37□□□□□ -3.59
CUX1P39880 MIR3668-201ENST00000582138 75 ntBASIC-7.58□□□□□ -3.62
CUX1P39880 MT-TR-201ENST00000387439 65 ntBASIC-7.68□□□□□ -3.64
CUX1P39880 AC099654.10-201ENST00000640395 161 ntBASIC-7.7□□□□□ -3.64
CUX1P39880 MIR4719-201ENST00000585233 84 ntBASIC-7.73□□□□□ -3.65
CUX1P39880 RNU4-37P-201ENST00000410214 84 ntBASIC-7.89□□□□□ -3.67
CUX1P39880 RNU6-638P-201ENST00000516582 104 ntBASIC-8□□□□□ -3.69
CUX1P39880 AL603908.1-201ENST00000406098 201 ntBASIC-8.13□□□□□ -3.71
CUX1P39880 snosnR66.1-201ENST00000391095 99 ntBASIC-8.16□□□□□ -3.72
CUX1P39880 U2.22-201ENST00000636441 106 ntBASIC-8.19□□□□□ -3.72
CUX1P39880 SNORA72.7-201ENST00000516349 94 ntBASIC-8.62□□□□□ -3.79
CUX1P39880 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-8.75□□□□□ -3.81
Retrieved 24 of 98,524 protein–RNA pairs in 234.5 ms