Protein–RNA interactions for Protein: P39880

CUX1, Homeobox protein cut-like 1, humanhuman

Predictions only

Length 1,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1P39880 RNU6-794P-201ENST00000517261 64 ntBASIC-6.72□□□□□ -3.49
CUX1P39880 Y_RNA.388-201ENST00000383919 113 ntBASIC-6.8□□□□□ -3.5
CUX1P39880 RNY4P29-201ENST00000410801 97 ntBASIC-6.81□□□□□ -3.5
CUX1P39880 MIR548M-201ENST00000408260 86 ntBASIC-6.84□□□□□ -3.5
CUX1P39880 MIR3910-1-201ENST00000580936 111 ntBASIC-6.9□□□□□ -3.51
CUX1P39880 AL606753.1-201ENST00000427435 87 ntBASIC-6.93□□□□□ -3.52
CUX1P39880 Y_RNA.685-201ENST00000516532 108 ntBASIC-7.03□□□□□ -3.54
CUX1P39880 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-7.18□□□□□ -3.56
CUX1P39880 AP001094.1-201ENST00000579805 193 ntBASIC-7.22□□□□□ -3.56
CUX1P39880 RNA5SP170-201ENST00000517150 101 ntBASIC-7.24□□□□□ -3.57
CUX1P39880 MTND4LP19-201ENST00000403051 166 ntBASIC-7.26□□□□□ -3.57
CUX1P39880 MIR1302-4-201ENST00000408701 150 ntBASIC-7.32□□□□□ -3.58
CUX1P39880 RNU6-1298P-201ENST00000362456 101 ntBASIC-7.37□□□□□ -3.59
CUX1P39880 MIR3668-201ENST00000582138 75 ntBASIC-7.58□□□□□ -3.62
CUX1P39880 MT-TR-201ENST00000387439 65 ntBASIC-7.68□□□□□ -3.64
CUX1P39880 AC099654.10-201ENST00000640395 161 ntBASIC-7.7□□□□□ -3.64
CUX1P39880 MIR4719-201ENST00000585233 84 ntBASIC-7.73□□□□□ -3.65
CUX1P39880 RNU4-37P-201ENST00000410214 84 ntBASIC-7.89□□□□□ -3.67
CUX1P39880 RNU6-638P-201ENST00000516582 104 ntBASIC-8□□□□□ -3.69
CUX1P39880 AL603908.1-201ENST00000406098 201 ntBASIC-8.13□□□□□ -3.71
CUX1P39880 snosnR66.1-201ENST00000391095 99 ntBASIC-8.16□□□□□ -3.72
CUX1P39880 U2.22-201ENST00000636441 106 ntBASIC-8.19□□□□□ -3.72
CUX1P39880 SNORA72.7-201ENST00000516349 94 ntBASIC-8.62□□□□□ -3.79
CUX1P39880 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-8.75□□□□□ -3.81
Retrieved 24 of 98,524 protein–RNA pairs in 5.7 ms