Protein–RNA interactions for Protein: A6NC98

CCDC88B, Coiled-coil domain-containing protein 88B, humanhuman

Predictions only

Length 1,476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88BA6NC98 RNU6-1011P-201ENST00000384668 107 ntBASIC-8.34□□□□□ -3.74
CCDC88BA6NC98 MIR548M-201ENST00000408260 86 ntBASIC-8.41□□□□□ -3.76
CCDC88BA6NC98 AL606753.1-201ENST00000427435 87 ntBASIC-8.45□□□□□ -3.76
CCDC88BA6NC98 MIR3910-1-201ENST00000580936 111 ntBASIC-8.47□□□□□ -3.77
CCDC88BA6NC98 RNU6-794P-201ENST00000517261 64 ntBASIC-8.48□□□□□ -3.77
CCDC88BA6NC98 RNU6-724P-201ENST00000390958 105 ntBASIC-8.49□□□□□ -3.77
CCDC88BA6NC98 Y_RNA.685-201ENST00000516532 108 ntBASIC-8.61□□□□□ -3.79
CCDC88BA6NC98 RNA5SP170-201ENST00000517150 101 ntBASIC-8.72□□□□□ -3.81
CCDC88BA6NC98 MTND4LP19-201ENST00000403051 166 ntBASIC-8.93□□□□□ -3.84
CCDC88BA6NC98 RNU6-1298P-201ENST00000362456 101 ntBASIC-8.94□□□□□ -3.84
CCDC88BA6NC98 MIR1302-4-201ENST00000408701 150 ntBASIC-8.95□□□□□ -3.84
CCDC88BA6NC98 AP001094.1-201ENST00000579805 193 ntBASIC-8.97□□□□□ -3.85
CCDC88BA6NC98 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-9.01□□□□□ -3.85
CCDC88BA6NC98 MIR3668-201ENST00000582138 75 ntBASIC-9.28□□□□□ -3.89
CCDC88BA6NC98 MT-TR-201ENST00000387439 65 ntBASIC-9.32□□□□□ -3.9
CCDC88BA6NC98 AC099654.10-201ENST00000640395 161 ntBASIC-9.48□□□□□ -3.93
CCDC88BA6NC98 MIR4719-201ENST00000585233 84 ntBASIC-9.52□□□□□ -3.93
CCDC88BA6NC98 RNU6-638P-201ENST00000516582 104 ntBASIC-9.62□□□□□ -3.95
CCDC88BA6NC98 RNU4-37P-201ENST00000410214 84 ntBASIC-9.78□□□□□ -3.97
CCDC88BA6NC98 U2.22-201ENST00000636441 106 ntBASIC-9.91□□□□□ -4
CCDC88BA6NC98 AL603908.1-201ENST00000406098 201 ntBASIC-9.93□□□□□ -4
CCDC88BA6NC98 snosnR66.1-201ENST00000391095 99 ntBASIC-10.11□□□□□ -4.03
CCDC88BA6NC98 SNORA72.7-201ENST00000516349 94 ntBASIC-10.4□□□□□ -4.07
CCDC88BA6NC98 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-10.52□□□□□ -4.09
Retrieved 24 of 98,524 protein–RNA pairs in 5.8 ms