Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SNORD113-3-201ENST00000364830 72 ntBASIC-1.3□□□□□ -2.62
PDLIM7Q9NR12 MIR1254-1-201ENST00000408257 97 ntBASIC-1.3□□□□□ -2.62
PDLIM7Q9NR12 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.32□□□□□ -2.62
PDLIM7Q9NR12 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.32□□□□□ -2.62
PDLIM7Q9NR12 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.32□□□□□ -2.62
PDLIM7Q9NR12 FTX_4.1-201ENST00000616291 147 ntBASIC-1.32□□□□□ -2.62
PDLIM7Q9NR12 MIR664B-201ENST00000626756 61 ntBASIC-1.32□□□□□ -2.62
PDLIM7Q9NR12 RNU6-836P-201ENST00000362920 107 ntBASIC-1.33□□□□□ -2.62
PDLIM7Q9NR12 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.34□□□□□ -2.62
PDLIM7Q9NR12 RNY4P27-201ENST00000363341 96 ntBASIC-1.35□□□□□ -2.63
PDLIM7Q9NR12 RNA5SP224-201ENST00000365069 126 ntBASIC-1.35□□□□□ -2.63
PDLIM7Q9NR12 AC097484.2-201ENST00000509147 251 ntBASIC-1.35□□□□□ -2.63
PDLIM7Q9NR12 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.36□□□□□ -2.63
PDLIM7Q9NR12 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.36□□□□□ -2.63
PDLIM7Q9NR12 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.37□□□□□ -2.63
PDLIM7Q9NR12 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.37□□□□□ -2.63
PDLIM7Q9NR12 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.37□□□□□ -2.63
PDLIM7Q9NR12 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.37□□□□□ -2.63
PDLIM7Q9NR12 RNU6-118P-201ENST00000516552 102 ntBASIC-1.37□□□□□ -2.63
PDLIM7Q9NR12 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.37□□□□□ -2.63
PDLIM7Q9NR12 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.37□□□□□ -2.63
PDLIM7Q9NR12 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.37□□□□□ -2.63
PDLIM7Q9NR12 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.37□□□□□ -2.63
PDLIM7Q9NR12 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.38□□□□□ -2.63
PDLIM7Q9NR12 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.38□□□□□ -2.63
PDLIM7Q9NR12 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.4□□□□□ -2.63
PDLIM7Q9NR12 RNU6-345P-201ENST00000517001 107 ntBASIC-1.4□□□□□ -2.63
PDLIM7Q9NR12 MIR496-201ENST00000385226 102 ntBASIC-1.41□□□□□ -2.64
PDLIM7Q9NR12 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.42□□□□□ -2.64
PDLIM7Q9NR12 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.42□□□□□ -2.64
PDLIM7Q9NR12 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-1.43□□□□□ -2.64
PDLIM7Q9NR12 MIR3139-201ENST00000579145 76 ntBASIC-1.43□□□□□ -2.64
PDLIM7Q9NR12 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.44□□□□□ -2.64
PDLIM7Q9NR12 SNORD45C-201ENST00000383893 79 ntBASIC-1.45□□□□□ -2.64
PDLIM7Q9NR12 SNORD111B-201ENST00000408587 80 ntBASIC-1.45□□□□□ -2.64
PDLIM7Q9NR12 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.45□□□□□ -2.64
PDLIM7Q9NR12 RNA5SP405-201ENST00000363059 114 ntBASIC-1.47□□□□□ -2.64
PDLIM7Q9NR12 MIR4748-201ENST00000578076 82 ntBASIC-1.47□□□□□ -2.64
PDLIM7Q9NR12 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.48□□□□□ -2.65
PDLIM7Q9NR12 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.49□□□□□ -2.65
PDLIM7Q9NR12 MT-TM-201ENST00000387377 68 ntBASIC-1.5□□□□□ -2.65
PDLIM7Q9NR12 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.52□□□□□ -2.65
PDLIM7Q9NR12 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.53□□□□□ -2.65
PDLIM7Q9NR12 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.53□□□□□ -2.65
PDLIM7Q9NR12 MIR656-201ENST00000385224 78 ntBASIC-1.53□□□□□ -2.65
PDLIM7Q9NR12 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
PDLIM7Q9NR12 RNU6-194P-201ENST00000363862 105 ntBASIC-1.55□□□□□ -2.66
PDLIM7Q9NR12 RNU6-485P-201ENST00000363475 107 ntBASIC-1.56□□□□□ -2.66
PDLIM7Q9NR12 RNA5SP93-201ENST00000362525 114 ntBASIC-1.58□□□□□ -2.66
PDLIM7Q9NR12 RNU6-119P-201ENST00000364882 107 ntBASIC-1.59□□□□□ -2.66
PDLIM7Q9NR12 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.61□□□□□ -2.67
PDLIM7Q9NR12 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.62□□□□□ -2.67
PDLIM7Q9NR12 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.63□□□□□ -2.67
PDLIM7Q9NR12 RNU6-854P-201ENST00000364036 107 ntBASIC-1.66□□□□□ -2.68
PDLIM7Q9NR12 RNY4P9-201ENST00000363194 97 ntBASIC-1.67□□□□□ -2.68
PDLIM7Q9NR12 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.67□□□□□ -2.68
PDLIM7Q9NR12 SNORD54-201ENST00000459159 67 ntBASIC-1.68□□□□□ -2.68
PDLIM7Q9NR12 RNU6-133P-201ENST00000383989 107 ntBASIC-1.69□□□□□ -2.68
PDLIM7Q9NR12 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.69□□□□□ -2.68
PDLIM7Q9NR12 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.71□□□□□ -2.68
PDLIM7Q9NR12 RNU6-737P-201ENST00000365370 107 ntBASIC-1.72□□□□□ -2.68
PDLIM7Q9NR12 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.72□□□□□ -2.68
PDLIM7Q9NR12 AL731768.1-201ENST00000603124 139 ntBASIC-1.72□□□□□ -2.68
PDLIM7Q9NR12 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.75□□□□□ -2.69
PDLIM7Q9NR12 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.75□□□□□ -2.69
PDLIM7Q9NR12 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.75□□□□□ -2.69
PDLIM7Q9NR12 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.75□□□□□ -2.69
PDLIM7Q9NR12 RNY4P7-201ENST00000364600 96 ntBASIC-1.77□□□□□ -2.69
PDLIM7Q9NR12 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.77□□□□□ -2.69
PDLIM7Q9NR12 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.78□□□□□ -2.69
PDLIM7Q9NR12 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.8□□□□□ -2.7
PDLIM7Q9NR12 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.81□□□□□ -2.7
PDLIM7Q9NR12 RNU6-230P-201ENST00000362457 104 ntBASIC-1.82□□□□□ -2.7
PDLIM7Q9NR12 MIR124-1-201ENST00000385275 85 ntBASIC-1.84□□□□□ -2.7
PDLIM7Q9NR12 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.85□□□□□ -2.71
PDLIM7Q9NR12 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.85□□□□□ -2.71
PDLIM7Q9NR12 RNU6-422P-201ENST00000384632 107 ntBASIC-1.86□□□□□ -2.71
PDLIM7Q9NR12 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.89□□□□□ -2.71
PDLIM7Q9NR12 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.89□□□□□ -2.71
PDLIM7Q9NR12 RNY4P25-201ENST00000459254 96 ntBASIC-1.91□□□□□ -2.72
PDLIM7Q9NR12 AL359920.1-201ENST00000618332 176 ntBASIC-1.91□□□□□ -2.72
PDLIM7Q9NR12 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.92□□□□□ -2.72
PDLIM7Q9NR12 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.92□□□□□ -2.72
PDLIM7Q9NR12 MIR5693-201ENST00000577722 73 ntBASIC-1.92□□□□□ -2.72
PDLIM7Q9NR12 SNORD115-45-201ENST00000391078 81 ntBASIC-1.94□□□□□ -2.72
PDLIM7Q9NR12 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.95□□□□□ -2.72
PDLIM7Q9NR12 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.95□□□□□ -2.72
PDLIM7Q9NR12 MIR548AH-201ENST00000637109 76 ntBASIC-1.95□□□□□ -2.72
PDLIM7Q9NR12 RNY4-201ENST00000516507 96 ntBASIC-1.96□□□□□ -2.72
PDLIM7Q9NR12 RNU6-894P-201ENST00000517094 105 ntBASIC-1.96□□□□□ -2.72
PDLIM7Q9NR12 RNU6-803P-201ENST00000516034 102 ntBASIC-2□□□□□ -2.73
PDLIM7Q9NR12 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.01□□□□□ -2.73
PDLIM7Q9NR12 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.03□□□□□ -2.73
PDLIM7Q9NR12 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.04□□□□□ -2.74
PDLIM7Q9NR12 SNORD114-13-201ENST00000364377 74 ntBASIC-2.04□□□□□ -2.74
PDLIM7Q9NR12 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.04□□□□□ -2.74
PDLIM7Q9NR12 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.08□□□□□ -2.74
PDLIM7Q9NR12 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.08□□□□□ -2.74
PDLIM7Q9NR12 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.09□□□□□ -2.74
PDLIM7Q9NR12 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.12□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 251.1 ms