Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.91□□□□□ -2.88
CHMP1AQ9HD42 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.93□□□□□ -2.88
CHMP1AQ9HD42 RNU6-936P-201ENST00000384005 107 ntBASIC-2.95□□□□□ -2.88
CHMP1AQ9HD42 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.95□□□□□ -2.88
CHMP1AQ9HD42 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.96□□□□□ -2.88
CHMP1AQ9HD42 RNY4P27-201ENST00000363341 96 ntBASIC-2.97□□□□□ -2.88
CHMP1AQ9HD42 RNU6-753P-201ENST00000363926 107 ntBASIC-2.97□□□□□ -2.88
CHMP1AQ9HD42 RNU6-808P-201ENST00000391233 108 ntBASIC-2.97□□□□□ -2.88
CHMP1AQ9HD42 RNU6-141P-201ENST00000410499 105 ntBASIC-2.97□□□□□ -2.88
CHMP1AQ9HD42 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.98□□□□□ -2.89
CHMP1AQ9HD42 RNU6-788P-201ENST00000390967 104 ntBASIC-3□□□□□ -2.89
CHMP1AQ9HD42 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.01□□□□□ -2.89
CHMP1AQ9HD42 RNY4P9-201ENST00000363194 97 ntBASIC-3.02□□□□□ -2.89
CHMP1AQ9HD42 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.02□□□□□ -2.89
CHMP1AQ9HD42 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.03□□□□□ -2.89
CHMP1AQ9HD42 MIR3139-201ENST00000579145 76 ntBASIC-3.03□□□□□ -2.89
CHMP1AQ9HD42 MIR4723-201ENST00000585070 81 ntBASIC-3.04□□□□□ -2.9
CHMP1AQ9HD42 RNU6-614P-201ENST00000384369 107 ntBASIC-3.05□□□□□ -2.9
CHMP1AQ9HD42 SNORD115.2-201ENST00000391126 59 ntBASIC-3.05□□□□□ -2.9
CHMP1AQ9HD42 MIR1207-201ENST00000408249 87 ntBASIC-3.05□□□□□ -2.9
CHMP1AQ9HD42 U6.59-201ENST00000615686 107 ntBASIC-3.05□□□□□ -2.9
CHMP1AQ9HD42 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.06□□□□□ -2.9
CHMP1AQ9HD42 RNA5SP224-201ENST00000365069 126 ntBASIC-3.06□□□□□ -2.9
CHMP1AQ9HD42 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.08□□□□□ -2.9
CHMP1AQ9HD42 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.08□□□□□ -2.9
CHMP1AQ9HD42 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.1□□□□□ -2.91
CHMP1AQ9HD42 RNU6-836P-201ENST00000362920 107 ntBASIC-3.11□□□□□ -2.91
CHMP1AQ9HD42 RNU6-930P-201ENST00000390938 100 ntBASIC-3.11□□□□□ -2.91
CHMP1AQ9HD42 RNU6-986P-201ENST00000363133 102 ntBASIC-3.12□□□□□ -2.91
CHMP1AQ9HD42 MIR656-201ENST00000385224 78 ntBASIC-3.14□□□□□ -2.91
CHMP1AQ9HD42 MIR548F3-201ENST00000408509 87 ntBASIC-3.14□□□□□ -2.91
CHMP1AQ9HD42 SNORD45C-201ENST00000383893 79 ntBASIC-3.15□□□□□ -2.91
CHMP1AQ9HD42 MT-TM-201ENST00000387377 68 ntBASIC-3.15□□□□□ -2.91
CHMP1AQ9HD42 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.15□□□□□ -2.91
CHMP1AQ9HD42 RNU6-59P-201ENST00000384787 107 ntBASIC-3.17□□□□□ -2.92
CHMP1AQ9HD42 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.17□□□□□ -2.92
CHMP1AQ9HD42 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.19□□□□□ -2.92
CHMP1AQ9HD42 RNU6-119P-201ENST00000364882 107 ntBASIC-3.22□□□□□ -2.92
CHMP1AQ9HD42 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.24□□□□□ -2.93
CHMP1AQ9HD42 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.25□□□□□ -2.93
CHMP1AQ9HD42 AL731768.1-201ENST00000603124 139 ntBASIC-3.26□□□□□ -2.93
CHMP1AQ9HD42 RNU6-1247P-201ENST00000516622 98 ntBASIC-3.29□□□□□ -2.94
CHMP1AQ9HD42 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.3□□□□□ -2.94
CHMP1AQ9HD42 MTND4LP19-201ENST00000403051 166 ntBASIC-3.31□□□□□ -2.94
CHMP1AQ9HD42 MIR545-201ENST00000385085 106 ntBASIC-3.32□□□□□ -2.94
CHMP1AQ9HD42 Y_RNA.475-201ENST00000384345 101 ntBASIC-3.34□□□□□ -2.94
CHMP1AQ9HD42 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.34□□□□□ -2.94
CHMP1AQ9HD42 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.35□□□□□ -2.95
CHMP1AQ9HD42 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.35□□□□□ -2.95
CHMP1AQ9HD42 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.37□□□□□ -2.95
CHMP1AQ9HD42 RNU6-854P-201ENST00000364036 107 ntBASIC-3.4□□□□□ -2.95
CHMP1AQ9HD42 MIR496-201ENST00000385226 102 ntBASIC-3.43□□□□□ -2.96
CHMP1AQ9HD42 RNU6-737P-201ENST00000365370 107 ntBASIC-3.46□□□□□ -2.96
CHMP1AQ9HD42 RNY4P25-201ENST00000459254 96 ntBASIC-3.52□□□□□ -2.97
CHMP1AQ9HD42 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.54□□□□□ -2.98
CHMP1AQ9HD42 AL359920.1-201ENST00000618332 176 ntBASIC-3.55□□□□□ -2.98
CHMP1AQ9HD42 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.56□□□□□ -2.98
CHMP1AQ9HD42 RNU6-230P-201ENST00000362457 104 ntBASIC-3.57□□□□□ -2.98
CHMP1AQ9HD42 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.57□□□□□ -2.98
CHMP1AQ9HD42 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.57□□□□□ -2.98
CHMP1AQ9HD42 SNORD54-201ENST00000459159 67 ntBASIC-3.58□□□□□ -2.98
CHMP1AQ9HD42 MIR5693-201ENST00000577722 73 ntBASIC-3.58□□□□□ -2.98
CHMP1AQ9HD42 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.64□□□□□ -2.99
CHMP1AQ9HD42 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.68□□□□□ -3
CHMP1AQ9HD42 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.68□□□□□ -3
CHMP1AQ9HD42 MIR124-1-201ENST00000385275 85 ntBASIC-3.7□□□□□ -3
CHMP1AQ9HD42 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.73□□□□□ -3.01
CHMP1AQ9HD42 RNU6-422P-201ENST00000384632 107 ntBASIC-3.73□□□□□ -3.01
CHMP1AQ9HD42 RNU4-37P-201ENST00000410214 84 ntBASIC-3.74□□□□□ -3.01
CHMP1AQ9HD42 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.76□□□□□ -3.01
CHMP1AQ9HD42 RNU6-987P-201ENST00000384759 104 ntBASIC-3.76□□□□□ -3.01
CHMP1AQ9HD42 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.77□□□□□ -3.01
CHMP1AQ9HD42 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.79□□□□□ -3.02
CHMP1AQ9HD42 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.79□□□□□ -3.02
CHMP1AQ9HD42 RNY4P7-201ENST00000364600 96 ntBASIC-3.83□□□□□ -3.02
CHMP1AQ9HD42 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.83□□□□□ -3.02
CHMP1AQ9HD42 SNORD115-45-201ENST00000391078 81 ntBASIC-3.83□□□□□ -3.02
CHMP1AQ9HD42 RNA5SP93-201ENST00000362525 114 ntBASIC-3.84□□□□□ -3.02
CHMP1AQ9HD42 U6.103-201ENST00000637085 61 ntBASIC-3.84□□□□□ -3.02
CHMP1AQ9HD42 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.86□□□□□ -3.03
CHMP1AQ9HD42 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.86□□□□□ -3.03
CHMP1AQ9HD42 MIR548AH-201ENST00000637109 76 ntBASIC-3.86□□□□□ -3.03
CHMP1AQ9HD42 SNORD111B-201ENST00000408587 80 ntBASIC-3.87□□□□□ -3.03
CHMP1AQ9HD42 SNORD114-13-201ENST00000364377 74 ntBASIC-3.88□□□□□ -3.03
CHMP1AQ9HD42 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.89□□□□□ -3.03
CHMP1AQ9HD42 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.89□□□□□ -3.03
CHMP1AQ9HD42 Y_RNA.421-201ENST00000384052 101 ntBASIC-4.01□□□□□ -3.05
CHMP1AQ9HD42 RNU6-485P-201ENST00000363475 107 ntBASIC-4.03□□□□□ -3.05
CHMP1AQ9HD42 Y_RNA.658-201ENST00000515990 97 ntBASIC-4.16□□□□□ -3.08
CHMP1AQ9HD42 Y_RNA.204-201ENST00000364112 102 ntBASIC-4.17□□□□□ -3.08
CHMP1AQ9HD42 RNU6-1091P-201ENST00000363945 107 ntBASIC-4.19□□□□□ -3.08
CHMP1AQ9HD42 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.22□□□□□ -3.08
CHMP1AQ9HD42 RNU6-724P-201ENST00000390958 105 ntBASIC-4.24□□□□□ -3.09
CHMP1AQ9HD42 RNY4-201ENST00000516507 96 ntBASIC-4.24□□□□□ -3.09
CHMP1AQ9HD42 Y_RNA.186-201ENST00000363899 92 ntBASIC-4.25□□□□□ -3.09
CHMP1AQ9HD42 RNU6-803P-201ENST00000516034 102 ntBASIC-4.27□□□□□ -3.09
CHMP1AQ9HD42 MIR509-1-201ENST00000385265 94 ntBASIC-4.28□□□□□ -3.09
CHMP1AQ9HD42 MIR509-2-201ENST00000390724 91 ntBASIC-4.28□□□□□ -3.09
CHMP1AQ9HD42 RNU6-133P-201ENST00000383989 107 ntBASIC-4.35□□□□□ -3.11
CHMP1AQ9HD42 RNU6-620P-201ENST00000384017 96 ntBASIC-4.38□□□□□ -3.11
Retrieved 100 of 98,524 protein–RNA pairs in 221.2 ms