Protein–RNA interactions for Protein: Q9H4Z3

PCIF1, Phosphorylated CTD-interacting factor 1, humanhuman

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1Q9H4Z3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.8□□□□□ -2.7
PCIF1Q9H4Z3 MIR548W-201ENST00000581970 74 ntBASIC-1.81□□□□□ -2.7
PCIF1Q9H4Z3 RNU6-194P-201ENST00000363862 105 ntBASIC-1.82□□□□□ -2.7
PCIF1Q9H4Z3 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.83□□□□□ -2.7
PCIF1Q9H4Z3 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.83□□□□□ -2.7
PCIF1Q9H4Z3 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.84□□□□□ -2.7
PCIF1Q9H4Z3 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.85□□□□□ -2.71
PCIF1Q9H4Z3 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.86□□□□□ -2.71
PCIF1Q9H4Z3 RNU6-986P-201ENST00000363133 102 ntBASIC-1.87□□□□□ -2.71
PCIF1Q9H4Z3 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.87□□□□□ -2.71
PCIF1Q9H4Z3 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.87□□□□□ -2.71
PCIF1Q9H4Z3 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.87□□□□□ -2.71
PCIF1Q9H4Z3 RNU6-912P-201ENST00000363800 104 ntBASIC-1.89□□□□□ -2.71
PCIF1Q9H4Z3 RNY4P7-201ENST00000364600 96 ntBASIC-1.89□□□□□ -2.71
PCIF1Q9H4Z3 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.9□□□□□ -2.71
PCIF1Q9H4Z3 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.91□□□□□ -2.72
PCIF1Q9H4Z3 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.91□□□□□ -2.72
PCIF1Q9H4Z3 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.94□□□□□ -2.72
PCIF1Q9H4Z3 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.95□□□□□ -2.72
PCIF1Q9H4Z3 MIR545-201ENST00000385085 106 ntBASIC-1.95□□□□□ -2.72
PCIF1Q9H4Z3 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.96□□□□□ -2.72
PCIF1Q9H4Z3 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.97□□□□□ -2.72
PCIF1Q9H4Z3 RNU6-822P-201ENST00000362707 106 ntBASIC-1.98□□□□□ -2.73
PCIF1Q9H4Z3 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.98□□□□□ -2.73
PCIF1Q9H4Z3 MIR4748-201ENST00000578076 82 ntBASIC-1.98□□□□□ -2.73
PCIF1Q9H4Z3 SNORD113-3-201ENST00000364830 72 ntBASIC-2□□□□□ -2.73
PCIF1Q9H4Z3 Y_RNA.382-201ENST00000365672 114 ntBASIC-2□□□□□ -2.73
PCIF1Q9H4Z3 RNY4-201ENST00000516507 96 ntBASIC-2□□□□□ -2.73
PCIF1Q9H4Z3 AC097484.2-201ENST00000509147 251 ntBASIC-2.01□□□□□ -2.73
PCIF1Q9H4Z3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.03□□□□□ -2.73
PCIF1Q9H4Z3 MIR1254-1-201ENST00000408257 97 ntBASIC-2.03□□□□□ -2.73
PCIF1Q9H4Z3 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.03□□□□□ -2.73
PCIF1Q9H4Z3 RNU6-59P-201ENST00000384787 107 ntBASIC-2.04□□□□□ -2.74
PCIF1Q9H4Z3 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.05□□□□□ -2.74
PCIF1Q9H4Z3 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.05□□□□□ -2.74
PCIF1Q9H4Z3 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.05□□□□□ -2.74
PCIF1Q9H4Z3 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.05□□□□□ -2.74
PCIF1Q9H4Z3 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.05□□□□□ -2.74
PCIF1Q9H4Z3 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.05□□□□□ -2.74
PCIF1Q9H4Z3 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.06□□□□□ -2.74
PCIF1Q9H4Z3 RNU6-230P-201ENST00000362457 104 ntBASIC-2.07□□□□□ -2.74
PCIF1Q9H4Z3 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.08□□□□□ -2.74
PCIF1Q9H4Z3 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.08□□□□□ -2.74
PCIF1Q9H4Z3 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.08□□□□□ -2.74
PCIF1Q9H4Z3 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.12□□□□□ -2.75
PCIF1Q9H4Z3 FTX_4.1-201ENST00000616291 147 ntBASIC-2.13□□□□□ -2.75
PCIF1Q9H4Z3 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.14□□□□□ -2.75
PCIF1Q9H4Z3 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.16□□□□□ -2.76
PCIF1Q9H4Z3 SNORD115.2-201ENST00000391126 59 ntBASIC-2.16□□□□□ -2.76
PCIF1Q9H4Z3 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.17□□□□□ -2.76
PCIF1Q9H4Z3 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.17□□□□□ -2.76
PCIF1Q9H4Z3 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.19□□□□□ -2.76
PCIF1Q9H4Z3 RNY4P9-201ENST00000363194 97 ntBASIC-2.21□□□□□ -2.76
PCIF1Q9H4Z3 RNU6-345P-201ENST00000517001 107 ntBASIC-2.21□□□□□ -2.76
PCIF1Q9H4Z3 RNU6-803P-201ENST00000516034 102 ntBASIC-2.22□□□□□ -2.76
PCIF1Q9H4Z3 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.24□□□□□ -2.77
PCIF1Q9H4Z3 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.25□□□□□ -2.77
PCIF1Q9H4Z3 RNA5SP224-201ENST00000365069 126 ntBASIC-2.25□□□□□ -2.77
PCIF1Q9H4Z3 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.25□□□□□ -2.77
PCIF1Q9H4Z3 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.26□□□□□ -2.77
PCIF1Q9H4Z3 RNU6-836P-201ENST00000362920 107 ntBASIC-2.28□□□□□ -2.77
PCIF1Q9H4Z3 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.29□□□□□ -2.78
PCIF1Q9H4Z3 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.29□□□□□ -2.78
PCIF1Q9H4Z3 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.3□□□□□ -2.78
PCIF1Q9H4Z3 MIR5693-201ENST00000577722 73 ntBASIC-2.32□□□□□ -2.78
PCIF1Q9H4Z3 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.36□□□□□ -2.79
PCIF1Q9H4Z3 SNORD45C-201ENST00000383893 79 ntBASIC-2.37□□□□□ -2.79
PCIF1Q9H4Z3 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.39□□□□□ -2.79
PCIF1Q9H4Z3 MIR656-201ENST00000385224 78 ntBASIC-2.41□□□□□ -2.8
PCIF1Q9H4Z3 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.42□□□□□ -2.8
PCIF1Q9H4Z3 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.43□□□□□ -2.8
PCIF1Q9H4Z3 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.44□□□□□ -2.8
PCIF1Q9H4Z3 RNY4P25-201ENST00000459254 96 ntBASIC-2.48□□□□□ -2.81
PCIF1Q9H4Z3 RNA5SP106-201ENST00000517274 100 ntBASIC-2.48□□□□□ -2.81
PCIF1Q9H4Z3 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.49□□□□□ -2.81
PCIF1Q9H4Z3 MIR509-1-201ENST00000385265 94 ntBASIC-2.5□□□□□ -2.81
PCIF1Q9H4Z3 MIR509-2-201ENST00000390724 91 ntBASIC-2.5□□□□□ -2.81
PCIF1Q9H4Z3 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.5□□□□□ -2.81
PCIF1Q9H4Z3 U6.103-201ENST00000637085 61 ntBASIC-2.51□□□□□ -2.81
PCIF1Q9H4Z3 AL731768.1-201ENST00000603124 139 ntBASIC-2.52□□□□□ -2.81
PCIF1Q9H4Z3 RNU6-737P-201ENST00000365370 107 ntBASIC-2.54□□□□□ -2.82
PCIF1Q9H4Z3 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.56□□□□□ -2.82
PCIF1Q9H4Z3 RNU6-854P-201ENST00000364036 107 ntBASIC-2.56□□□□□ -2.82
PCIF1Q9H4Z3 RNY4P10-201ENST00000365571 96 ntBASIC-2.57□□□□□ -2.82
PCIF1Q9H4Z3 SNORD114-13-201ENST00000364377 74 ntBASIC-2.6□□□□□ -2.83
PCIF1Q9H4Z3 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.6□□□□□ -2.83
PCIF1Q9H4Z3 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.6□□□□□ -2.83
PCIF1Q9H4Z3 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.63□□□□□ -2.83
PCIF1Q9H4Z3 SNORD111B-201ENST00000408587 80 ntBASIC-2.69□□□□□ -2.84
PCIF1Q9H4Z3 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.69□□□□□ -2.84
PCIF1Q9H4Z3 AL359920.1-201ENST00000618332 176 ntBASIC-2.69□□□□□ -2.84
PCIF1Q9H4Z3 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.7□□□□□ -2.84
PCIF1Q9H4Z3 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.7□□□□□ -2.84
PCIF1Q9H4Z3 RNU6-724P-201ENST00000390958 105 ntBASIC-2.72□□□□□ -2.84
PCIF1Q9H4Z3 RNU6-422P-201ENST00000384632 107 ntBASIC-2.78□□□□□ -2.85
PCIF1Q9H4Z3 MIR124-1-201ENST00000385275 85 ntBASIC-2.78□□□□□ -2.85
PCIF1Q9H4Z3 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.8□□□□□ -2.86
PCIF1Q9H4Z3 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.81□□□□□ -2.86
PCIF1Q9H4Z3 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.82□□□□□ -2.86
PCIF1Q9H4Z3 SNORD115-45-201ENST00000391078 81 ntBASIC-2.83□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms