Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MIR545-201ENST00000385085 106 ntBASIC-2.69□□□□□ -2.84
CCDC113Q9H0I3 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.71□□□□□ -2.84
CCDC113Q9H0I3 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.71□□□□□ -2.84
CCDC113Q9H0I3 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.71□□□□□ -2.84
CCDC113Q9H0I3 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.72□□□□□ -2.84
CCDC113Q9H0I3 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.72□□□□□ -2.84
CCDC113Q9H0I3 MIR4756-201ENST00000577874 78 ntBASIC-2.72□□□□□ -2.84
CCDC113Q9H0I3 FTX_4.1-201ENST00000616291 147 ntBASIC-2.74□□□□□ -2.85
CCDC113Q9H0I3 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.75□□□□□ -2.85
CCDC113Q9H0I3 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.75□□□□□ -2.85
CCDC113Q9H0I3 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.77□□□□□ -2.85
CCDC113Q9H0I3 RNU6-59P-201ENST00000384787 107 ntBASIC-2.77□□□□□ -2.85
CCDC113Q9H0I3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.77□□□□□ -2.85
CCDC113Q9H0I3 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.8□□□□□ -2.86
CCDC113Q9H0I3 RNU6-836P-201ENST00000362920 107 ntBASIC-2.82□□□□□ -2.86
CCDC113Q9H0I3 MIR664B-201ENST00000626756 61 ntBASIC-2.84□□□□□ -2.86
CCDC113Q9H0I3 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.85□□□□□ -2.87
CCDC113Q9H0I3 RNU6-983P-201ENST00000516004 103 ntBASIC-2.85□□□□□ -2.87
CCDC113Q9H0I3 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.88□□□□□ -2.87
CCDC113Q9H0I3 RNU6-118P-201ENST00000516552 102 ntBASIC-2.88□□□□□ -2.87
CCDC113Q9H0I3 RNY4P27-201ENST00000363341 96 ntBASIC-2.89□□□□□ -2.87
CCDC113Q9H0I3 RNA5SP224-201ENST00000365069 126 ntBASIC-2.89□□□□□ -2.87
CCDC113Q9H0I3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.9□□□□□ -2.87
CCDC113Q9H0I3 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.93□□□□□ -2.88
CCDC113Q9H0I3 SNORD45C-201ENST00000383893 79 ntBASIC-2.94□□□□□ -2.88
CCDC113Q9H0I3 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.95□□□□□ -2.88
CCDC113Q9H0I3 MIR4748-201ENST00000578076 82 ntBASIC-2.95□□□□□ -2.88
CCDC113Q9H0I3 RNU6-194P-201ENST00000363862 105 ntBASIC-2.97□□□□□ -2.88
CCDC113Q9H0I3 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.97□□□□□ -2.88
CCDC113Q9H0I3 MIR656-201ENST00000385224 78 ntBASIC-2.99□□□□□ -2.89
CCDC113Q9H0I3 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.03□□□□□ -2.89
CCDC113Q9H0I3 RNY4P9-201ENST00000363194 97 ntBASIC-3.06□□□□□ -2.9
CCDC113Q9H0I3 RNU6-119P-201ENST00000364882 107 ntBASIC-3.06□□□□□ -2.9
CCDC113Q9H0I3 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.06□□□□□ -2.9
CCDC113Q9H0I3 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.08□□□□□ -2.9
CCDC113Q9H0I3 RNA5SP405-201ENST00000363059 114 ntBASIC-3.09□□□□□ -2.9
CCDC113Q9H0I3 Y_RNA.225-201ENST00000364326 97 ntBASIC-3.14□□□□□ -2.91
CCDC113Q9H0I3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.16□□□□□ -2.92
CCDC113Q9H0I3 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.2□□□□□ -2.92
CCDC113Q9H0I3 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.24□□□□□ -2.93
CCDC113Q9H0I3 U6.103-201ENST00000637085 61 ntBASIC-3.24□□□□□ -2.93
CCDC113Q9H0I3 Y_RNA.475-201ENST00000384345 101 ntBASIC-3.25□□□□□ -2.93
CCDC113Q9H0I3 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.28□□□□□ -2.93
CCDC113Q9H0I3 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.28□□□□□ -2.93
CCDC113Q9H0I3 RNU6-1247P-201ENST00000516622 98 ntBASIC-3.3□□□□□ -2.94
CCDC113Q9H0I3 AL731768.1-201ENST00000603124 139 ntBASIC-3.36□□□□□ -2.95
CCDC113Q9H0I3 RNU6-737P-201ENST00000365370 107 ntBASIC-3.42□□□□□ -2.96
CCDC113Q9H0I3 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.42□□□□□ -2.96
CCDC113Q9H0I3 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.42□□□□□ -2.96
CCDC113Q9H0I3 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.44□□□□□ -2.96
CCDC113Q9H0I3 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.45□□□□□ -2.96
CCDC113Q9H0I3 MIR3139-201ENST00000579145 76 ntBASIC-3.45□□□□□ -2.96
CCDC113Q9H0I3 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.46□□□□□ -2.96
CCDC113Q9H0I3 RNU6-854P-201ENST00000364036 107 ntBASIC-3.47□□□□□ -2.96
CCDC113Q9H0I3 MIR496-201ENST00000385226 102 ntBASIC-3.47□□□□□ -2.96
CCDC113Q9H0I3 SNORD111B-201ENST00000408587 80 ntBASIC-3.49□□□□□ -2.97
CCDC113Q9H0I3 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.5□□□□□ -2.97
CCDC113Q9H0I3 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.51□□□□□ -2.97
CCDC113Q9H0I3 SNORD54-201ENST00000459159 67 ntBASIC-3.53□□□□□ -2.97
CCDC113Q9H0I3 RNU6-422P-201ENST00000384632 107 ntBASIC-3.55□□□□□ -2.98
CCDC113Q9H0I3 MT-TM-201ENST00000387377 68 ntBASIC-3.59□□□□□ -2.98
CCDC113Q9H0I3 RNY4P7-201ENST00000364600 96 ntBASIC-3.61□□□□□ -2.99
CCDC113Q9H0I3 RNU6-724P-201ENST00000390958 105 ntBASIC-3.61□□□□□ -2.99
CCDC113Q9H0I3 RNY4P25-201ENST00000459254 96 ntBASIC-3.63□□□□□ -2.99
CCDC113Q9H0I3 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.63□□□□□ -2.99
CCDC113Q9H0I3 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.64□□□□□ -2.99
CCDC113Q9H0I3 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.66□□□□□ -3
CCDC113Q9H0I3 RNU6-485P-201ENST00000363475 107 ntBASIC-3.66□□□□□ -3
CCDC113Q9H0I3 AL359920.1-201ENST00000618332 176 ntBASIC-3.7□□□□□ -3
CCDC113Q9H0I3 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.73□□□□□ -3.01
CCDC113Q9H0I3 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.74□□□□□ -3.01
CCDC113Q9H0I3 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.78□□□□□ -3.01
CCDC113Q9H0I3 MIR124-1-201ENST00000385275 85 ntBASIC-3.79□□□□□ -3.02
CCDC113Q9H0I3 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.8□□□□□ -3.02
CCDC113Q9H0I3 MIR5693-201ENST00000577722 73 ntBASIC-3.81□□□□□ -3.02
CCDC113Q9H0I3 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.82□□□□□ -3.02
CCDC113Q9H0I3 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.83□□□□□ -3.02
CCDC113Q9H0I3 RNU6-133P-201ENST00000383989 107 ntBASIC-3.87□□□□□ -3.03
CCDC113Q9H0I3 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.89□□□□□ -3.03
CCDC113Q9H0I3 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.89□□□□□ -3.03
CCDC113Q9H0I3 RNA5SP93-201ENST00000362525 114 ntBASIC-3.9□□□□□ -3.03
CCDC113Q9H0I3 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.9□□□□□ -3.03
CCDC113Q9H0I3 RNU6-230P-201ENST00000362457 104 ntBASIC-3.91□□□□□ -3.04
CCDC113Q9H0I3 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-3.92□□□□□ -3.04
CCDC113Q9H0I3 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.97□□□□□ -3.04
CCDC113Q9H0I3 Y_RNA.204-201ENST00000364112 102 ntBASIC-4□□□□□ -3.05
CCDC113Q9H0I3 SNORD115-45-201ENST00000391078 81 ntBASIC-4□□□□□ -3.05
CCDC113Q9H0I3 Y_RNA.79-201ENST00000362992 113 ntBASIC-4.04□□□□□ -3.06
CCDC113Q9H0I3 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.04□□□□□ -3.06
CCDC113Q9H0I3 MIR548AH-201ENST00000637109 76 ntBASIC-4.04□□□□□ -3.06
CCDC113Q9H0I3 Y_RNA.421-201ENST00000384052 101 ntBASIC-4.05□□□□□ -3.06
CCDC113Q9H0I3 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.13□□□□□ -3.07
CCDC113Q9H0I3 RNY4-201ENST00000516507 96 ntBASIC-4.13□□□□□ -3.07
CCDC113Q9H0I3 SNORD114-13-201ENST00000364377 74 ntBASIC-4.14□□□□□ -3.07
CCDC113Q9H0I3 RNU6-620P-201ENST00000384017 96 ntBASIC-4.19□□□□□ -3.08
CCDC113Q9H0I3 RNU6-1191P-201ENST00000516799 107 ntBASIC-4.2□□□□□ -3.08
CCDC113Q9H0I3 Y_RNA.186-201ENST00000363899 92 ntBASIC-4.23□□□□□ -3.09
CCDC113Q9H0I3 RNU6-627P-201ENST00000364032 102 ntBASIC-4.23□□□□□ -3.09
CCDC113Q9H0I3 RNU6-894P-201ENST00000517094 105 ntBASIC-4.41□□□□□ -3.12
CCDC113Q9H0I3 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.5□□□□□ -3.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms