Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 MIR1254-1-201ENST00000408257 97 ntBASIC-0.72□□□□□ -2.52
THBS3P49746 MIR1285-2-201ENST00000408311 88 ntBASIC-0.72□□□□□ -2.52
THBS3P49746 MIR548AM-201ENST00000584298 74 ntBASIC-0.72□□□□□ -2.52
THBS3P49746 SNORD113-3-201ENST00000364830 72 ntBASIC-0.73□□□□□ -2.53
THBS3P49746 Y_RNA.335-201ENST00000365299 96 ntBASIC-0.73□□□□□ -2.53
THBS3P49746 MIR4441-201ENST00000582623 100 ntBASIC-0.73□□□□□ -2.53
THBS3P49746 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.74□□□□□ -2.53
THBS3P49746 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.74□□□□□ -2.53
THBS3P49746 RNA5SP405-201ENST00000363059 114 ntBASIC-0.75□□□□□ -2.53
THBS3P49746 RNY4P27-201ENST00000363341 96 ntBASIC-0.75□□□□□ -2.53
THBS3P49746 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.75□□□□□ -2.53
THBS3P49746 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.75□□□□□ -2.53
THBS3P49746 MIR656-201ENST00000385224 78 ntBASIC-0.75□□□□□ -2.53
THBS3P49746 MIR496-201ENST00000385226 102 ntBASIC-0.75□□□□□ -2.53
THBS3P49746 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.75□□□□□ -2.53
THBS3P49746 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.75□□□□□ -2.53
THBS3P49746 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.75□□□□□ -2.53
THBS3P49746 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.76□□□□□ -2.53
THBS3P49746 RNU6-118P-201ENST00000516552 102 ntBASIC-0.76□□□□□ -2.53
THBS3P49746 MIR365A-201ENST00000362260 87 ntBASIC-0.77□□□□□ -2.53
THBS3P49746 RNU6-133P-201ENST00000383989 107 ntBASIC-0.77□□□□□ -2.53
THBS3P49746 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.77□□□□□ -2.53
THBS3P49746 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.78□□□□□ -2.53
THBS3P49746 AC097484.2-201ENST00000509147 251 ntBASIC-0.78□□□□□ -2.53
THBS3P49746 MIR3139-201ENST00000579145 76 ntBASIC-0.78□□□□□ -2.53
THBS3P49746 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.79□□□□□ -2.54
THBS3P49746 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.8□□□□□ -2.54
THBS3P49746 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.8□□□□□ -2.54
THBS3P49746 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.81□□□□□ -2.54
THBS3P49746 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.81□□□□□ -2.54
THBS3P49746 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.81□□□□□ -2.54
THBS3P49746 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.81□□□□□ -2.54
THBS3P49746 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.81□□□□□ -2.54
THBS3P49746 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.81□□□□□ -2.54
THBS3P49746 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.82□□□□□ -2.54
THBS3P49746 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.82□□□□□ -2.54
THBS3P49746 MIR4748-201ENST00000578076 82 ntBASIC-0.82□□□□□ -2.54
THBS3P49746 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
THBS3P49746 Y_RNA.406-201ENST00000383984 100 ntBASIC-0.84□□□□□ -2.54
THBS3P49746 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.84□□□□□ -2.54
THBS3P49746 MT-TM-201ENST00000387377 68 ntBASIC-0.84□□□□□ -2.54
THBS3P49746 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.84□□□□□ -2.54
THBS3P49746 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.85□□□□□ -2.55
THBS3P49746 RNA5SP93-201ENST00000362525 114 ntBASIC-0.87□□□□□ -2.55
THBS3P49746 MIR1207-201ENST00000408249 87 ntBASIC-0.87□□□□□ -2.55
THBS3P49746 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.87□□□□□ -2.55
THBS3P49746 RNU6-1091P-201ENST00000363945 107 ntBASIC-0.89□□□□□ -2.55
THBS3P49746 RNU6-894P-201ENST00000517094 105 ntBASIC-0.89□□□□□ -2.55
THBS3P49746 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.9□□□□□ -2.55
THBS3P49746 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.9□□□□□ -2.55
THBS3P49746 RNU6-194P-201ENST00000363862 105 ntBASIC-0.9□□□□□ -2.55
THBS3P49746 SNORD114-3-201ENST00000364969 75 ntBASIC-0.9□□□□□ -2.55
THBS3P49746 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.92□□□□□ -2.56
THBS3P49746 SNORD54-201ENST00000459159 67 ntBASIC-0.93□□□□□ -2.56
THBS3P49746 RNU6-854P-201ENST00000364036 107 ntBASIC-0.94□□□□□ -2.56
THBS3P49746 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.94□□□□□ -2.56
THBS3P49746 RNU6-119P-201ENST00000364882 107 ntBASIC-0.96□□□□□ -2.56
THBS3P49746 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.96□□□□□ -2.56
THBS3P49746 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.97□□□□□ -2.56
THBS3P49746 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.99□□□□□ -2.57
THBS3P49746 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.99□□□□□ -2.57
THBS3P49746 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.99□□□□□ -2.57
THBS3P49746 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.99□□□□□ -2.57
THBS3P49746 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.99□□□□□ -2.57
THBS3P49746 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.02□□□□□ -2.57
THBS3P49746 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.02□□□□□ -2.57
THBS3P49746 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.03□□□□□ -2.57
THBS3P49746 MIR5693-201ENST00000577722 73 ntBASIC-1.03□□□□□ -2.57
THBS3P49746 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.04□□□□□ -2.58
THBS3P49746 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.05□□□□□ -2.58
THBS3P49746 AL731768.1-201ENST00000603124 139 ntBASIC-1.05□□□□□ -2.58
THBS3P49746 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.05□□□□□ -2.58
THBS3P49746 RNY4P9-201ENST00000363194 97 ntBASIC-1.06□□□□□ -2.58
THBS3P49746 RNU6-422P-201ENST00000384632 107 ntBASIC-1.06□□□□□ -2.58
THBS3P49746 RNU6-230P-201ENST00000362457 104 ntBASIC-1.07□□□□□ -2.58
THBS3P49746 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.07□□□□□ -2.58
THBS3P49746 RNU6-737P-201ENST00000365370 107 ntBASIC-1.08□□□□□ -2.58
THBS3P49746 RNY4P7-201ENST00000364600 96 ntBASIC-1.09□□□□□ -2.58
THBS3P49746 SNORD114-13-201ENST00000364377 74 ntBASIC-1.1□□□□□ -2.59
THBS3P49746 RNY4-201ENST00000516507 96 ntBASIC-1.1□□□□□ -2.59
THBS3P49746 RNU6-803P-201ENST00000516034 102 ntBASIC-1.11□□□□□ -2.59
THBS3P49746 MIR124-1-201ENST00000385275 85 ntBASIC-1.13□□□□□ -2.59
THBS3P49746 AL359920.1-201ENST00000618332 176 ntBASIC-1.13□□□□□ -2.59
THBS3P49746 MIR548T-201ENST00000408369 74 ntBASIC-1.14□□□□□ -2.59
THBS3P49746 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.15□□□□□ -2.59
THBS3P49746 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.15□□□□□ -2.59
THBS3P49746 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.15□□□□□ -2.59
THBS3P49746 SNORD115-45-201ENST00000391078 81 ntBASIC-1.16□□□□□ -2.6
THBS3P49746 RNY4P25-201ENST00000459254 96 ntBASIC-1.16□□□□□ -2.6
THBS3P49746 MIR548AH-201ENST00000637109 76 ntBASIC-1.16□□□□□ -2.6
THBS3P49746 RNU6-620P-201ENST00000384017 96 ntBASIC-1.17□□□□□ -2.6
THBS3P49746 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.17□□□□□ -2.6
THBS3P49746 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.17□□□□□ -2.6
THBS3P49746 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.18□□□□□ -2.6
THBS3P49746 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.18□□□□□ -2.6
THBS3P49746 RNA5SP106-201ENST00000517274 100 ntBASIC-1.18□□□□□ -2.6
THBS3P49746 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.19□□□□□ -2.6
THBS3P49746 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.2□□□□□ -2.6
THBS3P49746 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.2□□□□□ -2.6
THBS3P49746 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms