Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.96□□□□□ -2.56
VARSP26640 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.96□□□□□ -2.56
VARSP26640 MIR487B-201ENST00000385021 84 ntBASIC-0.99□□□□□ -2.57
VARSP26640 MIR3165-201ENST00000579874 75 ntBASIC-0.99□□□□□ -2.57
VARSP26640 MIR365A-201ENST00000362260 87 ntBASIC-1□□□□□ -2.57
VARSP26640 MIR3115-201ENST00000577915 68 ntBASIC-1.01□□□□□ -2.57
VARSP26640 RNU6-983P-201ENST00000516004 103 ntBASIC-1.02□□□□□ -2.57
VARSP26640 RNA5SP461-201ENST00000516451 104 ntBASIC-1.02□□□□□ -2.57
VARSP26640 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.03□□□□□ -2.57
VARSP26640 RNA5SP86-201ENST00000390869 98 ntBASIC-1.03□□□□□ -2.57
VARSP26640 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.04□□□□□ -2.58
VARSP26640 RNA5SP180-201ENST00000516181 101 ntBASIC-1.04□□□□□ -2.58
VARSP26640 MIR548T-201ENST00000408369 74 ntBASIC-1.05□□□□□ -2.58
VARSP26640 MIR4441-201ENST00000582623 100 ntBASIC-1.05□□□□□ -2.58
VARSP26640 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.06□□□□□ -2.58
VARSP26640 MIR1285-2-201ENST00000408311 88 ntBASIC-1.06□□□□□ -2.58
VARSP26640 RNU6-706P-201ENST00000517229 104 ntBASIC-1.08□□□□□ -2.58
VARSP26640 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.09□□□□□ -2.58
VARSP26640 MIR5591-201ENST00000578248 65 ntBASIC-1.09□□□□□ -2.58
VARSP26640 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.09□□□□□ -2.58
VARSP26640 RNU6-854P-201ENST00000364036 107 ntBASIC-1.1□□□□□ -2.59
VARSP26640 MIR4770-201ENST00000579149 58 ntBASIC-1.11□□□□□ -2.59
VARSP26640 RNU6-422P-201ENST00000384632 107 ntBASIC-1.15□□□□□ -2.59
VARSP26640 HLA-S-202ENST00000425174 53 ntBASIC-1.15□□□□□ -2.59
VARSP26640 RNY4P27-201ENST00000363341 96 ntBASIC-1.16□□□□□ -2.6
VARSP26640 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.18□□□□□ -2.6
VARSP26640 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.2□□□□□ -2.6
VARSP26640 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.21□□□□□ -2.6
VARSP26640 AC108019.1-201ENST00000512540 175 ntBASIC-1.22□□□□□ -2.6
VARSP26640 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.23□□□□□ -2.61
VARSP26640 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.23□□□□□ -2.61
VARSP26640 RNU6-737P-201ENST00000365370 107 ntBASIC-1.25□□□□□ -2.61
VARSP26640 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.26□□□□□ -2.61
VARSP26640 RNU6-620P-201ENST00000384017 96 ntBASIC-1.27□□□□□ -2.61
VARSP26640 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.27□□□□□ -2.61
VARSP26640 MIR4756-201ENST00000577874 78 ntBASIC-1.27□□□□□ -2.61
VARSP26640 MIR1246-201ENST00000636535 73 ntBASIC-1.3□□□□□ -2.62
VARSP26640 RNU6-226P-201ENST00000363778 107 ntBASIC-1.33□□□□□ -2.62
VARSP26640 SNORD18.1-201ENST00000363807 70 ntBASIC-1.33□□□□□ -2.62
VARSP26640 RNU6-118P-201ENST00000516552 102 ntBASIC-1.33□□□□□ -2.62
VARSP26640 MIR4748-201ENST00000578076 82 ntBASIC-1.33□□□□□ -2.62
VARSP26640 AL731768.1-201ENST00000603124 139 ntBASIC-1.35□□□□□ -2.63
VARSP26640 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
VARSP26640 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.36□□□□□ -2.63
VARSP26640 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
VARSP26640 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.37□□□□□ -2.63
VARSP26640 MIR664B-201ENST00000626756 61 ntBASIC-1.37□□□□□ -2.63
VARSP26640 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.38□□□□□ -2.63
VARSP26640 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.38□□□□□ -2.63
VARSP26640 MIR124-1-201ENST00000385275 85 ntBASIC-1.39□□□□□ -2.63
VARSP26640 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.41□□□□□ -2.64
VARSP26640 RNY4P9-201ENST00000363194 97 ntBASIC-1.42□□□□□ -2.64
VARSP26640 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.43□□□□□ -2.64
VARSP26640 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.44□□□□□ -2.64
VARSP26640 RNU6-119P-201ENST00000364882 107 ntBASIC-1.45□□□□□ -2.64
VARSP26640 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.45□□□□□ -2.64
VARSP26640 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.45□□□□□ -2.64
VARSP26640 RNU6-627P-201ENST00000364032 102 ntBASIC-1.46□□□□□ -2.64
VARSP26640 RNU6-194P-201ENST00000363862 105 ntBASIC-1.47□□□□□ -2.64
VARSP26640 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.48□□□□□ -2.65
VARSP26640 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.48□□□□□ -2.65
VARSP26640 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.49□□□□□ -2.65
VARSP26640 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.49□□□□□ -2.65
VARSP26640 RNY4P7-201ENST00000364600 96 ntBASIC-1.49□□□□□ -2.65
VARSP26640 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.49□□□□□ -2.65
VARSP26640 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.51□□□□□ -2.65
VARSP26640 MIR548AH-201ENST00000637109 76 ntBASIC-1.51□□□□□ -2.65
VARSP26640 RNA5SP405-201ENST00000363059 114 ntBASIC-1.52□□□□□ -2.65
VARSP26640 AL359920.1-201ENST00000618332 176 ntBASIC-1.54□□□□□ -2.66
VARSP26640 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.57□□□□□ -2.66
VARSP26640 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.58□□□□□ -2.66
VARSP26640 MIR496-201ENST00000385226 102 ntBASIC-1.6□□□□□ -2.67
VARSP26640 SNORD115-45-201ENST00000391078 81 ntBASIC-1.6□□□□□ -2.67
VARSP26640 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.61□□□□□ -2.67
VARSP26640 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.62□□□□□ -2.67
VARSP26640 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.63□□□□□ -2.67
VARSP26640 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.63□□□□□ -2.67
VARSP26640 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.64□□□□□ -2.67
VARSP26640 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.65□□□□□ -2.67
VARSP26640 RNY4P25-201ENST00000459254 96 ntBASIC-1.67□□□□□ -2.68
VARSP26640 SNORD54-201ENST00000459159 67 ntBASIC-1.72□□□□□ -2.68
VARSP26640 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.72□□□□□ -2.68
VARSP26640 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.77□□□□□ -2.69
VARSP26640 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.77□□□□□ -2.69
VARSP26640 MIR5693-201ENST00000577722 73 ntBASIC-1.8□□□□□ -2.7
VARSP26640 RNY4-201ENST00000516507 96 ntBASIC-1.81□□□□□ -2.7
VARSP26640 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.83□□□□□ -2.7
VARSP26640 MIR3139-201ENST00000579145 76 ntBASIC-1.83□□□□□ -2.7
VARSP26640 RNA5SP93-201ENST00000362525 114 ntBASIC-1.85□□□□□ -2.71
VARSP26640 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.86□□□□□ -2.71
VARSP26640 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.89□□□□□ -2.71
VARSP26640 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.9□□□□□ -2.71
VARSP26640 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.91□□□□□ -2.72
VARSP26640 MT-TM-201ENST00000387377 68 ntBASIC-1.91□□□□□ -2.72
VARSP26640 SNORD114-13-201ENST00000364377 74 ntBASIC-1.93□□□□□ -2.72
VARSP26640 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.93□□□□□ -2.72
VARSP26640 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.98□□□□□ -2.73
VARSP26640 Y_RNA.397-201ENST00000383950 98 ntBASIC-2□□□□□ -2.73
VARSP26640 RNU4-85P-201ENST00000364675 123 ntBASIC-2.01□□□□□ -2.73
VARSP26640 RNU6-230P-201ENST00000362457 104 ntBASIC-2.02□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 228.6 ms