Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR4290-201ENST00000583807 95 ntBASIC0.19□□□□□ -2.38
COL25A1Q9BXS0 FTX_4.1-201ENST00000616291 147 ntBASIC0.19□□□□□ -2.38
COL25A1Q9BXS0 Y_RNA.55-201ENST00000362797 102 ntBASIC0.17□□□□□ -2.38
COL25A1Q9BXS0 SNORD114-28-201ENST00000363610 72 ntBASIC0.17□□□□□ -2.38
COL25A1Q9BXS0 RNU6-912P-201ENST00000363800 104 ntBASIC0.17□□□□□ -2.38
COL25A1Q9BXS0 SNORD114-12-201ENST00000365400 75 ntBASIC0.17□□□□□ -2.38
COL25A1Q9BXS0 SNORA18.1-201ENST00000363418 128 ntBASIC0.16□□□□□ -2.38
COL25A1Q9BXS0 Y_RNA.204-201ENST00000364112 102 ntBASIC0.16□□□□□ -2.38
COL25A1Q9BXS0 Y_RNA.406-201ENST00000383984 100 ntBASIC0.16□□□□□ -2.38
COL25A1Q9BXS0 SNORD114-11-201ENST00000363738 75 ntBASIC0.15□□□□□ -2.39
COL25A1Q9BXS0 SNORD45C-201ENST00000383893 79 ntBASIC0.15□□□□□ -2.39
COL25A1Q9BXS0 MIR214-201ENST00000385214 110 ntBASIC0.15□□□□□ -2.39
COL25A1Q9BXS0 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
COL25A1Q9BXS0 MIR3666-201ENST00000607845 111 ntBASIC0.15□□□□□ -2.39
COL25A1Q9BXS0 RNY4P27-201ENST00000363341 96 ntBASIC0.14□□□□□ -2.39
COL25A1Q9BXS0 Y_RNA.335-201ENST00000365299 96 ntBASIC0.14□□□□□ -2.39
COL25A1Q9BXS0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.14□□□□□ -2.39
COL25A1Q9BXS0 RNY4P7-201ENST00000364600 96 ntBASIC0.13□□□□□ -2.39
COL25A1Q9BXS0 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.13□□□□□ -2.39
COL25A1Q9BXS0 MIR4788-201ENST00000639104 80 ntBASIC0.13□□□□□ -2.39
COL25A1Q9BXS0 MIR8064-201ENST00000612863 90 ntBASIC0.12□□□□□ -2.39
COL25A1Q9BXS0 MIR587-201ENST00000384845 96 ntBASIC0.11□□□□□ -2.39
COL25A1Q9BXS0 AC018880.2-201ENST00000414265 201 ntBASIC0.11□□□□□ -2.39
COL25A1Q9BXS0 MIR365A-201ENST00000362260 87 ntBASIC0.09□□□□□ -2.4
COL25A1Q9BXS0 SNORD114-16-201ENST00000363044 70 ntBASIC0.09□□□□□ -2.4
COL25A1Q9BXS0 RNA5SP300-201ENST00000391197 107 ntBASIC0.09□□□□□ -2.4
COL25A1Q9BXS0 MIR378F-201ENST00000578143 78 ntBASIC0.09□□□□□ -2.4
COL25A1Q9BXS0 MIR1295B-201ENST00000636144 60 ntBASIC0.09□□□□□ -2.4
COL25A1Q9BXS0 RNU6-79P-201ENST00000362511 107 ntBASIC0.07□□□□□ -2.4
COL25A1Q9BXS0 MIR147A-201ENST00000385079 72 ntBASIC0.07□□□□□ -2.4
COL25A1Q9BXS0 SNORD4A-201ENST00000459174 72 ntBASIC0.06□□□□□ -2.4
COL25A1Q9BXS0 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
COL25A1Q9BXS0 RNU6-431P-201ENST00000383874 107 ntBASIC0.05□□□□□ -2.4
COL25A1Q9BXS0 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
COL25A1Q9BXS0 AC021146.6-201ENST00000514659 117 ntBASIC0.05□□□□□ -2.4
COL25A1Q9BXS0 MIR6818-201ENST00000621576 65 ntBASIC0.05□□□□□ -2.4
COL25A1Q9BXS0 Y_RNA.484-201ENST00000384389 103 ntBASIC0.04□□□□□ -2.4
COL25A1Q9BXS0 MIR656-201ENST00000385224 78 ntBASIC0.03□□□□□ -2.4
COL25A1Q9BXS0 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.03□□□□□ -2.4
COL25A1Q9BXS0 Y_RNA.181-201ENST00000363872 101 ntBASIC0.02□□□□□ -2.41
COL25A1Q9BXS0 MIR3681-201ENST00000580089 72 ntBASIC0.02□□□□□ -2.41
COL25A1Q9BXS0 RNU6-164P-201ENST00000364604 103 ntBASIC0□□□□□ -2.41
COL25A1Q9BXS0 MIR4441-201ENST00000582623 100 ntBASIC0□□□□□ -2.41
COL25A1Q9BXS0 SNORD64-201ENST00000386683 67 ntBASIC-0.01□□□□□ -2.41
COL25A1Q9BXS0 AL500527.2-201ENST00000454105 95 ntBASIC-0.01□□□□□ -2.41
COL25A1Q9BXS0 RNA5SP461-201ENST00000516451 104 ntBASIC-0.01□□□□□ -2.41
COL25A1Q9BXS0 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.02□□□□□ -2.41
COL25A1Q9BXS0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
COL25A1Q9BXS0 RNU6-345P-201ENST00000517001 107 ntBASIC-0.02□□□□□ -2.41
COL25A1Q9BXS0 MIR1254-1-201ENST00000408257 97 ntBASIC-0.04□□□□□ -2.42
COL25A1Q9BXS0 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.04□□□□□ -2.42
COL25A1Q9BXS0 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.05□□□□□ -2.42
COL25A1Q9BXS0 RNU6-10P-201ENST00000384036 107 ntBASIC-0.05□□□□□ -2.42
COL25A1Q9BXS0 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.05□□□□□ -2.42
COL25A1Q9BXS0 MT-TQ-201ENST00000387372 72 ntBASIC-0.05□□□□□ -2.42
COL25A1Q9BXS0 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.07□□□□□ -2.42
COL25A1Q9BXS0 MIR1285-2-201ENST00000408311 88 ntBASIC-0.07□□□□□ -2.42
COL25A1Q9BXS0 SNORA3B-201ENST00000391305 131 ntBASIC-0.09□□□□□ -2.42
COL25A1Q9BXS0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.09□□□□□ -2.42
COL25A1Q9BXS0 MIR382-201ENST00000637119 76 ntBASIC-0.09□□□□□ -2.42
COL25A1Q9BXS0 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.1□□□□□ -2.43
COL25A1Q9BXS0 MIR548H1-201ENST00000408610 102 ntBASIC-0.11□□□□□ -2.43
COL25A1Q9BXS0 SNORD114-14-201ENST00000362723 75 ntBASIC-0.12□□□□□ -2.43
COL25A1Q9BXS0 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.12□□□□□ -2.43
COL25A1Q9BXS0 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.12□□□□□ -2.43
COL25A1Q9BXS0 RNU7-134P-201ENST00000458997 64 ntBASIC-0.12□□□□□ -2.43
COL25A1Q9BXS0 MIR6738-201ENST00000619620 64 ntBASIC-0.12□□□□□ -2.43
COL25A1Q9BXS0 RNA5SP180-201ENST00000516181 101 ntBASIC-0.13□□□□□ -2.43
COL25A1Q9BXS0 RNY4-201ENST00000516507 96 ntBASIC-0.13□□□□□ -2.43
COL25A1Q9BXS0 MIR4436A-201ENST00000585278 85 ntBASIC-0.13□□□□□ -2.43
COL25A1Q9BXS0 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.14□□□□□ -2.43
COL25A1Q9BXS0 SNORA32.3-201ENST00000384772 121 ntBASIC-0.14□□□□□ -2.43
COL25A1Q9BXS0 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.15□□□□□ -2.43
COL25A1Q9BXS0 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.15□□□□□ -2.43
COL25A1Q9BXS0 RNU6-284P-201ENST00000411105 106 ntBASIC-0.15□□□□□ -2.43
COL25A1Q9BXS0 snoU83B.1-201ENST00000517136 88 ntBASIC-0.15□□□□□ -2.43
COL25A1Q9BXS0 MIR4324-201ENST00000584846 72 ntBASIC-0.17□□□□□ -2.44
COL25A1Q9BXS0 MIR6874-201ENST00000635894 71 ntBASIC-0.17□□□□□ -2.44
COL25A1Q9BXS0 AC091912.2-201ENST00000624798 167 ntBASIC-0.18□□□□□ -2.44
COL25A1Q9BXS0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.19□□□□□ -2.44
COL25A1Q9BXS0 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.19□□□□□ -2.44
COL25A1Q9BXS0 RNU6-400P-201ENST00000391173 106 ntBASIC-0.19□□□□□ -2.44
COL25A1Q9BXS0 MIR548AZ-201ENST00000616567 95 ntBASIC-0.19□□□□□ -2.44
COL25A1Q9BXS0 MIR196A2-201ENST00000385189 110 ntBASIC-0.2□□□□□ -2.44
COL25A1Q9BXS0 SNORD114-25-201ENST00000363742 72 ntBASIC-0.21□□□□□ -2.44
COL25A1Q9BXS0 SNORD126-201ENST00000459475 77 ntBASIC-0.21□□□□□ -2.44
COL25A1Q9BXS0 RNU6-320P-201ENST00000516511 106 ntBASIC-0.21□□□□□ -2.44
COL25A1Q9BXS0 SNORD113-3-201ENST00000364830 72 ntBASIC-0.22□□□□□ -2.44
COL25A1Q9BXS0 SNORD14C-201ENST00000365382 88 ntBASIC-0.22□□□□□ -2.44
COL25A1Q9BXS0 RNU6-576P-201ENST00000390854 102 ntBASIC-0.22□□□□□ -2.44
COL25A1Q9BXS0 snoU13.10-201ENST00000459301 103 ntBASIC-0.24□□□□□ -2.45
COL25A1Q9BXS0 MIR548W-201ENST00000581970 74 ntBASIC-0.24□□□□□ -2.45
COL25A1Q9BXS0 MIR3123-201ENST00000583417 75 ntBASIC-0.26□□□□□ -2.45
COL25A1Q9BXS0 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.26□□□□□ -2.45
COL25A1Q9BXS0 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.29□□□□□ -2.46
COL25A1Q9BXS0 RNU6-620P-201ENST00000384017 96 ntBASIC-0.3□□□□□ -2.46
COL25A1Q9BXS0 MIR3115-201ENST00000577915 68 ntBASIC-0.3□□□□□ -2.46
COL25A1Q9BXS0 RNU6-119P-201ENST00000364882 107 ntBASIC-0.31□□□□□ -2.46
COL25A1Q9BXS0 SCARNA17-201ENST00000516183 144 ntBASIC-0.31□□□□□ -2.46
COL25A1Q9BXS0 MIR496-201ENST00000385226 102 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms