Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL590491.3-201ENST00000610731 82 ntBASIC0.42□□□□□ -2.34
VPS9D1Q9Y2B5 MIR924-201ENST00000638017 53 ntBASIC0.42□□□□□ -2.34
VPS9D1Q9Y2B5 MIR330-201ENST00000362196 94 ntBASIC0.41□□□□□ -2.34
VPS9D1Q9Y2B5 SNORD114-5-201ENST00000362928 70 ntBASIC0.41□□□□□ -2.34
VPS9D1Q9Y2B5 Y_RNA.189-201ENST00000363959 112 ntBASIC0.41□□□□□ -2.34
VPS9D1Q9Y2B5 RNU6-563P-201ENST00000364872 108 ntBASIC0.41□□□□□ -2.34
VPS9D1Q9Y2B5 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
VPS9D1Q9Y2B5 MIR204-201ENST00000385200 110 ntBASIC0.4□□□□□ -2.35
VPS9D1Q9Y2B5 SNORD18C-201ENST00000362704 69 ntBASIC0.39□□□□□ -2.35
VPS9D1Q9Y2B5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.39□□□□□ -2.35
VPS9D1Q9Y2B5 RNU6-929P-201ENST00000384429 107 ntBASIC0.39□□□□□ -2.35
VPS9D1Q9Y2B5 SNORA13-201ENST00000458790 133 ntBASIC0.39□□□□□ -2.35
VPS9D1Q9Y2B5 Y_RNA.115-201ENST00000363272 98 ntBASIC0.38□□□□□ -2.35
VPS9D1Q9Y2B5 SNORD114-9-201ENST00000364370 72 ntBASIC0.38□□□□□ -2.35
VPS9D1Q9Y2B5 Y_RNA.374-201ENST00000365606 101 ntBASIC0.38□□□□□ -2.35
VPS9D1Q9Y2B5 MIR4263-201ENST00000584745 83 ntBASIC0.38□□□□□ -2.35
VPS9D1Q9Y2B5 Y_RNA.260-201ENST00000364628 101 ntBASIC0.37□□□□□ -2.35
VPS9D1Q9Y2B5 MIR8087-201ENST00000612745 78 ntBASIC0.37□□□□□ -2.35
VPS9D1Q9Y2B5 MIR2909-201ENST00000617113 69 ntBASIC0.37□□□□□ -2.35
VPS9D1Q9Y2B5 Y_RNA.781-201ENST00000620301 103 ntBASIC0.37□□□□□ -2.35
VPS9D1Q9Y2B5 SNORA32.1-201ENST00000364514 115 ntBASIC0.36□□□□□ -2.35
VPS9D1Q9Y2B5 RNU6-695P-201ENST00000391157 104 ntBASIC0.36□□□□□ -2.35
VPS9D1Q9Y2B5 MIR548AJ2-201ENST00000408539 92 ntBASIC0.36□□□□□ -2.35
VPS9D1Q9Y2B5 MIR1197-201ENST00000408818 88 ntBASIC0.36□□□□□ -2.35
VPS9D1Q9Y2B5 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
VPS9D1Q9Y2B5 RNA5SP224-201ENST00000365069 126 ntBASIC0.35□□□□□ -2.35
VPS9D1Q9Y2B5 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
VPS9D1Q9Y2B5 MIR4645-201ENST00000583158 77 ntBASIC0.33□□□□□ -2.36
VPS9D1Q9Y2B5 AC104692.1-201ENST00000472406 90 ntBASIC0.32□□□□□ -2.36
VPS9D1Q9Y2B5 RNA5SP26-201ENST00000362406 119 ntBASIC0.31□□□□□ -2.36
VPS9D1Q9Y2B5 AC023932.2-201ENST00000603176 175 ntBASIC0.29□□□□□ -2.36
VPS9D1Q9Y2B5 Y_RNA.335-201ENST00000365299 96 ntBASIC0.27□□□□□ -2.37
VPS9D1Q9Y2B5 SNORD114-12-201ENST00000365400 75 ntBASIC0.27□□□□□ -2.37
VPS9D1Q9Y2B5 MIR6718-201ENST00000616153 80 ntBASIC0.27□□□□□ -2.37
VPS9D1Q9Y2B5 FTX_4.1-201ENST00000616291 147 ntBASIC0.27□□□□□ -2.37
VPS9D1Q9Y2B5 Y_RNA.406-201ENST00000383984 100 ntBASIC0.26□□□□□ -2.37
VPS9D1Q9Y2B5 MIR548T-201ENST00000408369 74 ntBASIC0.26□□□□□ -2.37
VPS9D1Q9Y2B5 SNORA62.5-201ENST00000516634 120 ntBASIC0.26□□□□□ -2.37
VPS9D1Q9Y2B5 RNU6-912P-201ENST00000363800 104 ntBASIC0.25□□□□□ -2.37
VPS9D1Q9Y2B5 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.25□□□□□ -2.37
VPS9D1Q9Y2B5 RNA5SP257-201ENST00000363023 116 ntBASIC0.24□□□□□ -2.37
VPS9D1Q9Y2B5 RNU6-1169P-201ENST00000363537 103 ntBASIC0.24□□□□□ -2.37
VPS9D1Q9Y2B5 SNORD45C-201ENST00000383893 79 ntBASIC0.24□□□□□ -2.37
VPS9D1Q9Y2B5 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.24□□□□□ -2.37
VPS9D1Q9Y2B5 RNA5SP63-201ENST00000391225 112 ntBASIC0.23□□□□□ -2.37
VPS9D1Q9Y2B5 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
VPS9D1Q9Y2B5 SNORA18.1-201ENST00000363418 128 ntBASIC0.22□□□□□ -2.37
VPS9D1Q9Y2B5 MIR3666-201ENST00000607845 111 ntBASIC0.21□□□□□ -2.38
VPS9D1Q9Y2B5 AC018880.2-201ENST00000414265 201 ntBASIC0.2□□□□□ -2.38
VPS9D1Q9Y2B5 MIR4788-201ENST00000639104 80 ntBASIC0.2□□□□□ -2.38
VPS9D1Q9Y2B5 MIR4290-201ENST00000583807 95 ntBASIC0.19□□□□□ -2.38
VPS9D1Q9Y2B5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
VPS9D1Q9Y2B5 SNORD114-11-201ENST00000363738 75 ntBASIC0.17□□□□□ -2.38
VPS9D1Q9Y2B5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
VPS9D1Q9Y2B5 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
VPS9D1Q9Y2B5 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.16□□□□□ -2.38
VPS9D1Q9Y2B5 MIR1295B-201ENST00000636144 60 ntBASIC0.16□□□□□ -2.38
VPS9D1Q9Y2B5 AC021146.6-201ENST00000514659 117 ntBASIC0.15□□□□□ -2.39
VPS9D1Q9Y2B5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.12□□□□□ -2.39
VPS9D1Q9Y2B5 MIR5190-201ENST00000581537 80 ntBASIC0.12□□□□□ -2.39
VPS9D1Q9Y2B5 Y_RNA.68-201ENST00000362881 102 ntBASIC0.11□□□□□ -2.39
VPS9D1Q9Y2B5 Y_RNA.484-201ENST00000384389 103 ntBASIC0.1□□□□□ -2.39
VPS9D1Q9Y2B5 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
VPS9D1Q9Y2B5 RNA5SP300-201ENST00000391197 107 ntBASIC0.1□□□□□ -2.39
VPS9D1Q9Y2B5 SNORD4A-201ENST00000459174 72 ntBASIC0.09□□□□□ -2.4
VPS9D1Q9Y2B5 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.09□□□□□ -2.4
VPS9D1Q9Y2B5 RNU6-79P-201ENST00000362511 107 ntBASIC0.08□□□□□ -2.4
VPS9D1Q9Y2B5 MIR656-201ENST00000385224 78 ntBASIC0.08□□□□□ -2.4
VPS9D1Q9Y2B5 Z95118.1-201ENST00000421372 247 ntBASIC0.08□□□□□ -2.4
VPS9D1Q9Y2B5 MIR147A-201ENST00000385079 72 ntBASIC0.07□□□□□ -2.4
VPS9D1Q9Y2B5 MIR4667-201ENST00000578933 66 ntBASIC0.07□□□□□ -2.4
VPS9D1Q9Y2B5 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
VPS9D1Q9Y2B5 Y_RNA.433-201ENST00000384089 102 ntBASIC0.06□□□□□ -2.4
VPS9D1Q9Y2B5 MIR6818-201ENST00000621576 65 ntBASIC0.06□□□□□ -2.4
VPS9D1Q9Y2B5 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
VPS9D1Q9Y2B5 RNU6-164P-201ENST00000364604 103 ntBASIC0.03□□□□□ -2.4
VPS9D1Q9Y2B5 RNU6-431P-201ENST00000383874 107 ntBASIC0.03□□□□□ -2.4
VPS9D1Q9Y2B5 AL500527.2-201ENST00000454105 95 ntBASIC0.03□□□□□ -2.4
VPS9D1Q9Y2B5 RNU6-345P-201ENST00000517001 107 ntBASIC0.03□□□□□ -2.4
VPS9D1Q9Y2B5 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
VPS9D1Q9Y2B5 RNA5SP285-201ENST00000516619 119 ntBASIC0.02□□□□□ -2.41
VPS9D1Q9Y2B5 MIR6759-201ENST00000638110 65 ntBASIC0.02□□□□□ -2.41
VPS9D1Q9Y2B5 Y_RNA.178-201ENST00000363832 102 ntBASIC0.01□□□□□ -2.41
VPS9D1Q9Y2B5 RNU6-1324P-201ENST00000384222 107 ntBASIC0□□□□□ -2.41
VPS9D1Q9Y2B5 MIR4436A-201ENST00000585278 85 ntBASIC0□□□□□ -2.41
VPS9D1Q9Y2B5 SNORD64-201ENST00000386683 67 ntBASIC-0.01□□□□□ -2.41
VPS9D1Q9Y2B5 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
VPS9D1Q9Y2B5 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.01□□□□□ -2.41
VPS9D1Q9Y2B5 MIR1254-1-201ENST00000408257 97 ntBASIC-0.02□□□□□ -2.41
VPS9D1Q9Y2B5 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.02□□□□□ -2.41
VPS9D1Q9Y2B5 RNU7-134P-201ENST00000458997 64 ntBASIC-0.03□□□□□ -2.41
VPS9D1Q9Y2B5 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.06□□□□□ -2.42
VPS9D1Q9Y2B5 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.06□□□□□ -2.42
VPS9D1Q9Y2B5 MIR4802-201ENST00000581881 80 ntBASIC-0.06□□□□□ -2.42
VPS9D1Q9Y2B5 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.07□□□□□ -2.42
VPS9D1Q9Y2B5 MIR196A2-201ENST00000385189 110 ntBASIC-0.07□□□□□ -2.42
VPS9D1Q9Y2B5 RNA5SP476-201ENST00000516613 103 ntBASIC-0.07□□□□□ -2.42
VPS9D1Q9Y2B5 MIR3681-201ENST00000580089 72 ntBASIC-0.07□□□□□ -2.42
VPS9D1Q9Y2B5 SNORA3B-201ENST00000391305 131 ntBASIC-0.08□□□□□ -2.42
VPS9D1Q9Y2B5 snoU83B.1-201ENST00000517136 88 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 234.7 ms