Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MIR518B-201ENST00000385127 83 ntBASIC0.63□□□□□ -2.31
PDZRN3Q9UPQ7 AC114737.2-201ENST00000421583 173 ntBASIC0.63□□□□□ -2.31
PDZRN3Q9UPQ7 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.63□□□□□ -2.31
PDZRN3Q9UPQ7 SNORA50A-201ENST00000384225 134 ntBASIC0.62□□□□□ -2.31
PDZRN3Q9UPQ7 RNU7-165P-201ENST00000458864 60 ntBASIC0.62□□□□□ -2.31
PDZRN3Q9UPQ7 AC090625.1-201ENST00000357130 210 ntBASIC0.61□□□□□ -2.31
PDZRN3Q9UPQ7 MIR593-201ENST00000384856 100 ntBASIC0.6□□□□□ -2.31
PDZRN3Q9UPQ7 SNORD75.1-201ENST00000408373 60 ntBASIC0.6□□□□□ -2.31
PDZRN3Q9UPQ7 Y_RNA.781-201ENST00000620301 103 ntBASIC0.59□□□□□ -2.31
PDZRN3Q9UPQ7 RNA5SP26-201ENST00000362406 119 ntBASIC0.58□□□□□ -2.32
PDZRN3Q9UPQ7 Y_RNA.189-201ENST00000363959 112 ntBASIC0.56□□□□□ -2.32
PDZRN3Q9UPQ7 AP000533.3-201ENST00000447704 118 ntBASIC0.56□□□□□ -2.32
PDZRN3Q9UPQ7 SNORA62.5-201ENST00000516634 120 ntBASIC0.56□□□□□ -2.32
PDZRN3Q9UPQ7 MIR4743-201ENST00000584576 69 ntBASIC0.56□□□□□ -2.32
PDZRN3Q9UPQ7 MIR145-201ENST00000384967 88 ntBASIC0.55□□□□□ -2.32
PDZRN3Q9UPQ7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.55□□□□□ -2.32
PDZRN3Q9UPQ7 RNU7-159P-201ENST00000459284 62 ntBASIC0.54□□□□□ -2.32
PDZRN3Q9UPQ7 MIR4645-201ENST00000583158 77 ntBASIC0.54□□□□□ -2.32
PDZRN3Q9UPQ7 AC023932.2-201ENST00000603176 175 ntBASIC0.54□□□□□ -2.32
PDZRN3Q9UPQ7 MIR610-201ENST00000385139 96 ntBASIC0.53□□□□□ -2.32
PDZRN3Q9UPQ7 MIR656-201ENST00000385224 78 ntBASIC0.53□□□□□ -2.32
PDZRN3Q9UPQ7 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
PDZRN3Q9UPQ7 RNA5SP66-201ENST00000517178 101 ntBASIC0.53□□□□□ -2.32
PDZRN3Q9UPQ7 AL590491.3-201ENST00000610731 82 ntBASIC0.53□□□□□ -2.32
PDZRN3Q9UPQ7 MIR2909-201ENST00000617113 69 ntBASIC0.53□□□□□ -2.32
PDZRN3Q9UPQ7 SNORD49B-201ENST00000365172 72 ntBASIC0.52□□□□□ -2.33
PDZRN3Q9UPQ7 RNA5SP63-201ENST00000391225 112 ntBASIC0.51□□□□□ -2.33
PDZRN3Q9UPQ7 MIR3179-1-201ENST00000578940 84 ntBASIC0.51□□□□□ -2.33
PDZRN3Q9UPQ7 MIR3179-2-201ENST00000579107 84 ntBASIC0.51□□□□□ -2.33
PDZRN3Q9UPQ7 MIR3179-3-201ENST00000579566 84 ntBASIC0.51□□□□□ -2.33
PDZRN3Q9UPQ7 MIR3179-4-201ENST00000617599 84 ntBASIC0.51□□□□□ -2.33
PDZRN3Q9UPQ7 MIR4315-1-201ENST00000636800 73 ntBASIC0.5□□□□□ -2.33
PDZRN3Q9UPQ7 MIR4315-2-201ENST00000640925 73 ntBASIC0.5□□□□□ -2.33
PDZRN3Q9UPQ7 AC093726.3-201ENST00000637588 150 ntBASIC0.49□□□□□ -2.33
PDZRN3Q9UPQ7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.49□□□□□ -2.33
PDZRN3Q9UPQ7 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.48□□□□□ -2.33
PDZRN3Q9UPQ7 SNORA32.1-201ENST00000364514 115 ntBASIC0.47□□□□□ -2.33
PDZRN3Q9UPQ7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.47□□□□□ -2.33
PDZRN3Q9UPQ7 RNU6-46P-201ENST00000383860 107 ntBASIC0.46□□□□□ -2.34
PDZRN3Q9UPQ7 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.46□□□□□ -2.34
PDZRN3Q9UPQ7 MIR4514-201ENST00000581410 57 ntBASIC0.45□□□□□ -2.34
PDZRN3Q9UPQ7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
PDZRN3Q9UPQ7 RNA5SP214-201ENST00000363378 118 ntBASIC0.43□□□□□ -2.34
PDZRN3Q9UPQ7 MIR1254-1-201ENST00000408257 97 ntBASIC0.43□□□□□ -2.34
PDZRN3Q9UPQ7 RNU6-1324P-201ENST00000384222 107 ntBASIC0.42□□□□□ -2.34
PDZRN3Q9UPQ7 SNORD114-5-201ENST00000362928 70 ntBASIC0.41□□□□□ -2.34
PDZRN3Q9UPQ7 RNU6-345P-201ENST00000517001 107 ntBASIC0.41□□□□□ -2.34
PDZRN3Q9UPQ7 Y_RNA.434-201ENST00000384090 100 ntBASIC0.4□□□□□ -2.35
PDZRN3Q9UPQ7 RNU6-284P-201ENST00000411105 106 ntBASIC0.4□□□□□ -2.35
PDZRN3Q9UPQ7 SNORA13-201ENST00000458790 133 ntBASIC0.4□□□□□ -2.35
PDZRN3Q9UPQ7 RNA5SP134-201ENST00000516492 96 ntBASIC0.4□□□□□ -2.35
PDZRN3Q9UPQ7 SNORD114-9-201ENST00000364370 72 ntBASIC0.39□□□□□ -2.35
PDZRN3Q9UPQ7 MIR204-201ENST00000385200 110 ntBASIC0.39□□□□□ -2.35
PDZRN3Q9UPQ7 RNU6-79P-201ENST00000362511 107 ntBASIC0.38□□□□□ -2.35
PDZRN3Q9UPQ7 AC018880.2-201ENST00000414265 201 ntBASIC0.38□□□□□ -2.35
PDZRN3Q9UPQ7 AL500527.2-201ENST00000454105 95 ntBASIC0.36□□□□□ -2.35
PDZRN3Q9UPQ7 RNU6-620P-201ENST00000384017 96 ntBASIC0.35□□□□□ -2.35
PDZRN3Q9UPQ7 RNU6-1340P-201ENST00000384438 107 ntBASIC0.35□□□□□ -2.35
PDZRN3Q9UPQ7 RNA5SP285-201ENST00000516619 119 ntBASIC0.35□□□□□ -2.35
PDZRN3Q9UPQ7 Z95118.1-201ENST00000421372 247 ntBASIC0.34□□□□□ -2.36
PDZRN3Q9UPQ7 RNU6-1024P-201ENST00000384199 107 ntBASIC0.32□□□□□ -2.36
PDZRN3Q9UPQ7 MIR4263-201ENST00000584745 83 ntBASIC0.32□□□□□ -2.36
PDZRN3Q9UPQ7 MIR6718-201ENST00000616153 80 ntBASIC0.32□□□□□ -2.36
PDZRN3Q9UPQ7 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.31□□□□□ -2.36
PDZRN3Q9UPQ7 SNORD114-11-201ENST00000363738 75 ntBASIC0.3□□□□□ -2.36
PDZRN3Q9UPQ7 RNA5SP476-201ENST00000516613 103 ntBASIC0.3□□□□□ -2.36
PDZRN3Q9UPQ7 SNORD19B.1-201ENST00000630615 80 ntBASIC0.3□□□□□ -2.36
PDZRN3Q9UPQ7 MIR6818-201ENST00000621576 65 ntBASIC0.29□□□□□ -2.36
PDZRN3Q9UPQ7 MIR5093-201ENST00000583199 100 ntBASIC0.28□□□□□ -2.36
PDZRN3Q9UPQ7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.36
PDZRN3Q9UPQ7 Y_RNA.349-201ENST00000365406 102 ntBASIC0.27□□□□□ -2.37
PDZRN3Q9UPQ7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.27□□□□□ -2.37
PDZRN3Q9UPQ7 MIR548H1-201ENST00000408610 102 ntBASIC0.27□□□□□ -2.37
PDZRN3Q9UPQ7 RNU6-431P-201ENST00000383874 107 ntBASIC0.26□□□□□ -2.37
PDZRN3Q9UPQ7 MIR147A-201ENST00000385079 72 ntBASIC0.26□□□□□ -2.37
PDZRN3Q9UPQ7 AC104692.1-201ENST00000472406 90 ntBASIC0.26□□□□□ -2.37
PDZRN3Q9UPQ7 RNU6-164P-201ENST00000364604 103 ntBASIC0.25□□□□□ -2.37
PDZRN3Q9UPQ7 SNORD114-12-201ENST00000365400 75 ntBASIC0.25□□□□□ -2.37
PDZRN3Q9UPQ7 MIR4788-201ENST00000639104 80 ntBASIC0.23□□□□□ -2.37
PDZRN3Q9UPQ7 MIR1295A-201ENST00000408463 79 ntBASIC0.22□□□□□ -2.37
PDZRN3Q9UPQ7 MIR5190-201ENST00000581537 80 ntBASIC0.22□□□□□ -2.37
PDZRN3Q9UPQ7 MIR4290-201ENST00000583807 95 ntBASIC0.22□□□□□ -2.37
PDZRN3Q9UPQ7 MIR3666-201ENST00000607845 111 ntBASIC0.22□□□□□ -2.37
PDZRN3Q9UPQ7 SNORA18.1-201ENST00000363418 128 ntBASIC0.21□□□□□ -2.38
PDZRN3Q9UPQ7 MIR6759-201ENST00000638110 65 ntBASIC0.21□□□□□ -2.38
PDZRN3Q9UPQ7 RNU6-854P-201ENST00000364036 107 ntBASIC0.2□□□□□ -2.38
PDZRN3Q9UPQ7 SNORD113-3-201ENST00000364830 72 ntBASIC0.19□□□□□ -2.38
PDZRN3Q9UPQ7 Y_RNA.484-201ENST00000384389 103 ntBASIC0.19□□□□□ -2.38
PDZRN3Q9UPQ7 SNORD64-201ENST00000386683 67 ntBASIC0.19□□□□□ -2.38
PDZRN3Q9UPQ7 RNU6-1043P-201ENST00000410355 99 ntBASIC0.19□□□□□ -2.38
PDZRN3Q9UPQ7 HAR1A.1-201ENST00000459583 118 ntBASIC0.18□□□□□ -2.38
PDZRN3Q9UPQ7 RNU6-1034P-201ENST00000365335 101 ntBASIC0.17□□□□□ -2.38
PDZRN3Q9UPQ7 MIR4768-201ENST00000585270 74 ntBASIC0.17□□□□□ -2.38
PDZRN3Q9UPQ7 RNA5SP300-201ENST00000391197 107 ntBASIC0.16□□□□□ -2.38
PDZRN3Q9UPQ7 RNU7-134P-201ENST00000458997 64 ntBASIC0.16□□□□□ -2.38
PDZRN3Q9UPQ7 AC021146.6-201ENST00000514659 117 ntBASIC0.16□□□□□ -2.38
PDZRN3Q9UPQ7 Y_RNA.59-201ENST00000362828 102 ntBASIC0.14□□□□□ -2.39
PDZRN3Q9UPQ7 Y_RNA.449-201ENST00000384187 102 ntBASIC0.14□□□□□ -2.39
PDZRN3Q9UPQ7 MIR548W-201ENST00000581970 74 ntBASIC0.13□□□□□ -2.39
PDZRN3Q9UPQ7 MIR6086-201ENST00000638065 55 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms