Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
SALL3Q9BXA9 Y_RNA.406-201ENST00000383984 100 ntBASIC0.33□□□□□ -2.36
SALL3Q9BXA9 RNA5SP163-201ENST00000410304 99 ntBASIC0.33□□□□□ -2.36
SALL3Q9BXA9 AL445193.1-201ENST00000441183 141 ntBASIC0.33□□□□□ -2.36
SALL3Q9BXA9 AC120024.2-201ENST00000576526 175 ntBASIC0.33□□□□□ -2.36
SALL3Q9BXA9 MIR4645-201ENST00000583158 77 ntBASIC0.33□□□□□ -2.36
SALL3Q9BXA9 MIR4743-201ENST00000584576 69 ntBASIC0.33□□□□□ -2.36
SALL3Q9BXA9 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
SALL3Q9BXA9 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
SALL3Q9BXA9 SNORD45C-201ENST00000383893 79 ntBASIC0.32□□□□□ -2.36
SALL3Q9BXA9 MIR892B-201ENST00000401279 77 ntBASIC0.32□□□□□ -2.36
SALL3Q9BXA9 Y_RNA.603-201ENST00000410571 108 ntBASIC0.32□□□□□ -2.36
SALL3Q9BXA9 MIR6851-201ENST00000617060 67 ntBASIC0.32□□□□□ -2.36
SALL3Q9BXA9 RNU6-854P-201ENST00000364036 107 ntBASIC0.31□□□□□ -2.36
SALL3Q9BXA9 Y_RNA.434-201ENST00000384090 100 ntBASIC0.31□□□□□ -2.36
SALL3Q9BXA9 RNU6-929P-201ENST00000384429 107 ntBASIC0.31□□□□□ -2.36
SALL3Q9BXA9 RNA5SP25-201ENST00000410815 110 ntBASIC0.31□□□□□ -2.36
SALL3Q9BXA9 AL353691.2-201ENST00000443795 59 ntBASIC0.31□□□□□ -2.36
SALL3Q9BXA9 RNY1P9-201ENST00000532431 109 ntBASIC0.31□□□□□ -2.36
SALL3Q9BXA9 CR383656.4-201ENST00000546909 122 ntBASIC0.31□□□□□ -2.36
SALL3Q9BXA9 AL590491.3-201ENST00000610731 82 ntBASIC0.31□□□□□ -2.36
SALL3Q9BXA9 MIR148A-201ENST00000362215 68 ntBASIC0.3□□□□□ -2.36
SALL3Q9BXA9 SNORD115-33-201ENST00000363723 82 ntBASIC0.3□□□□□ -2.36
SALL3Q9BXA9 SNORD114-17-201ENST00000364699 75 ntBASIC0.3□□□□□ -2.36
SALL3Q9BXA9 SNORD60-201ENST00000383903 83 ntBASIC0.3□□□□□ -2.36
SALL3Q9BXA9 RNU7-134P-201ENST00000458997 64 ntBASIC0.3□□□□□ -2.36
SALL3Q9BXA9 SNORD22.1-201ENST00000516331 125 ntBASIC0.3□□□□□ -2.36
SALL3Q9BXA9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.3□□□□□ -2.36
SALL3Q9BXA9 RNU6-1024P-201ENST00000384199 107 ntBASIC0.29□□□□□ -2.36
SALL3Q9BXA9 RNU6-176P-201ENST00000517196 105 ntBASIC0.29□□□□□ -2.36
SALL3Q9BXA9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.29□□□□□ -2.36
SALL3Q9BXA9 MIR593-201ENST00000384856 100 ntBASIC0.28□□□□□ -2.36
SALL3Q9BXA9 MIR507-201ENST00000385234 94 ntBASIC0.28□□□□□ -2.36
SALL3Q9BXA9 Y_RNA.59-201ENST00000362828 102 ntBASIC0.27□□□□□ -2.37
SALL3Q9BXA9 Y_RNA.189-201ENST00000363959 112 ntBASIC0.27□□□□□ -2.37
SALL3Q9BXA9 SNORD114-15-201ENST00000364687 72 ntBASIC0.27□□□□□ -2.37
SALL3Q9BXA9 RNU6-1324P-201ENST00000384222 107 ntBASIC0.27□□□□□ -2.37
SALL3Q9BXA9 MIR1254-1-201ENST00000408257 97 ntBASIC0.27□□□□□ -2.37
SALL3Q9BXA9 RNU7-165P-201ENST00000458864 60 ntBASIC0.27□□□□□ -2.37
SALL3Q9BXA9 MIR5190-201ENST00000581537 80 ntBASIC0.27□□□□□ -2.37
SALL3Q9BXA9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
SALL3Q9BXA9 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
SALL3Q9BXA9 SNORD18.2-201ENST00000459604 70 ntBASIC0.26□□□□□ -2.37
SALL3Q9BXA9 RNU6-758P-201ENST00000516292 89 ntBASIC0.26□□□□□ -2.37
SALL3Q9BXA9 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
SALL3Q9BXA9 MIR4768-201ENST00000585270 74 ntBASIC0.26□□□□□ -2.37
SALL3Q9BXA9 MIR145-201ENST00000384967 88 ntBASIC0.25□□□□□ -2.37
SALL3Q9BXA9 MIR610-201ENST00000385139 96 ntBASIC0.25□□□□□ -2.37
SALL3Q9BXA9 MIR4802-201ENST00000581881 80 ntBASIC0.25□□□□□ -2.37
SALL3Q9BXA9 MIR6718-201ENST00000616153 80 ntBASIC0.25□□□□□ -2.37
SALL3Q9BXA9 Y_RNA.129-201ENST00000363392 110 ntBASIC0.24□□□□□ -2.37
SALL3Q9BXA9 RNU6-901P-201ENST00000384593 106 ntBASIC0.24□□□□□ -2.37
SALL3Q9BXA9 SNORD75.1-201ENST00000408373 60 ntBASIC0.24□□□□□ -2.37
SALL3Q9BXA9 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.24□□□□□ -2.37
SALL3Q9BXA9 MIRLET7A2-201ENST00000362105 72 ntBASIC0.23□□□□□ -2.37
SALL3Q9BXA9 SNORD114-5-201ENST00000362928 70 ntBASIC0.23□□□□□ -2.37
SALL3Q9BXA9 SNORD114-11-201ENST00000363738 75 ntBASIC0.23□□□□□ -2.37
SALL3Q9BXA9 AP000533.3-201ENST00000447704 118 ntBASIC0.23□□□□□ -2.37
SALL3Q9BXA9 MIR4263-201ENST00000584745 83 ntBASIC0.23□□□□□ -2.37
SALL3Q9BXA9 MIR371B-201ENST00000638082 66 ntBASIC0.23□□□□□ -2.37
SALL3Q9BXA9 Y_RNA.63-201ENST00000362841 102 ntBASIC0.22□□□□□ -2.37
SALL3Q9BXA9 SNORD113-3-201ENST00000364830 72 ntBASIC0.22□□□□□ -2.37
SALL3Q9BXA9 RNU6-431P-201ENST00000383874 107 ntBASIC0.22□□□□□ -2.37
SALL3Q9BXA9 MIR656-201ENST00000385224 78 ntBASIC0.22□□□□□ -2.37
SALL3Q9BXA9 IGLVI-20-201ENST00000519296 130 ntBASIC0.22□□□□□ -2.37
SALL3Q9BXA9 RNA5SP368-201ENST00000364298 116 ntBASIC0.21□□□□□ -2.38
SALL3Q9BXA9 RNA5SP331-201ENST00000364986 107 ntBASIC0.21□□□□□ -2.38
SALL3Q9BXA9 SNORD18C-201ENST00000362704 69 ntBASIC0.2□□□□□ -2.38
SALL3Q9BXA9 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
SALL3Q9BXA9 MIR1295A-201ENST00000408463 79 ntBASIC0.2□□□□□ -2.38
SALL3Q9BXA9 RNU6-284P-201ENST00000411105 106 ntBASIC0.2□□□□□ -2.38
SALL3Q9BXA9 SNORD114-9-201ENST00000364370 72 ntBASIC0.19□□□□□ -2.38
SALL3Q9BXA9 MIR518B-201ENST00000385127 83 ntBASIC0.19□□□□□ -2.38
SALL3Q9BXA9 SNORA13-201ENST00000458790 133 ntBASIC0.19□□□□□ -2.38
SALL3Q9BXA9 MIR548W-201ENST00000581970 74 ntBASIC0.19□□□□□ -2.38
SALL3Q9BXA9 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.19□□□□□ -2.38
SALL3Q9BXA9 MIR379-201ENST00000362218 67 ntBASIC0.18□□□□□ -2.38
SALL3Q9BXA9 SNORD74.6-201ENST00000364796 70 ntBASIC0.18□□□□□ -2.38
SALL3Q9BXA9 SNORD49B-201ENST00000365172 72 ntBASIC0.18□□□□□ -2.38
SALL3Q9BXA9 Y_RNA.335-201ENST00000365299 96 ntBASIC0.18□□□□□ -2.38
SALL3Q9BXA9 RNU6-620P-201ENST00000384017 96 ntBASIC0.18□□□□□ -2.38
SALL3Q9BXA9 snoU83B.1-201ENST00000517136 88 ntBASIC0.18□□□□□ -2.38
SALL3Q9BXA9 MIR3179-1-201ENST00000578940 84 ntBASIC0.18□□□□□ -2.38
SALL3Q9BXA9 MIR3179-2-201ENST00000579107 84 ntBASIC0.18□□□□□ -2.38
SALL3Q9BXA9 MIR3179-3-201ENST00000579566 84 ntBASIC0.18□□□□□ -2.38
SALL3Q9BXA9 MIR3179-4-201ENST00000617599 84 ntBASIC0.18□□□□□ -2.38
SALL3Q9BXA9 Y_RNA.449-201ENST00000384187 102 ntBASIC0.17□□□□□ -2.38
SALL3Q9BXA9 AL500527.2-201ENST00000454105 95 ntBASIC0.17□□□□□ -2.38
SALL3Q9BXA9 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.17□□□□□ -2.38
SALL3Q9BXA9 SNORD114-31-201ENST00000363219 75 ntBASIC0.16□□□□□ -2.38
SALL3Q9BXA9 MIR124-1-201ENST00000385275 85 ntBASIC0.16□□□□□ -2.38
SALL3Q9BXA9 MIR548H1-201ENST00000408610 102 ntBASIC0.16□□□□□ -2.38
SALL3Q9BXA9 RNU6-1043P-201ENST00000410355 99 ntBASIC0.16□□□□□ -2.38
SALL3Q9BXA9 snoU13.10-201ENST00000459301 103 ntBASIC0.16□□□□□ -2.38
SALL3Q9BXA9 RNA5SP66-201ENST00000517178 101 ntBASIC0.16□□□□□ -2.38
SALL3Q9BXA9 MIR6818-201ENST00000621576 65 ntBASIC0.16□□□□□ -2.38
SALL3Q9BXA9 Y_RNA.349-201ENST00000365406 102 ntBASIC0.15□□□□□ -2.38
SALL3Q9BXA9 MIR147A-201ENST00000385079 72 ntBASIC0.15□□□□□ -2.38
SALL3Q9BXA9 SNORD64-201ENST00000386683 67 ntBASIC0.15□□□□□ -2.38
SALL3Q9BXA9 RNU7-159P-201ENST00000459284 62 ntBASIC0.15□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms