Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RNU6-1327P-201ENST00000365302 105 ntBASIC0.64□□□□□ -2.31
CD44P16070 SNORD114-22-201ENST00000365423 72 ntBASIC0.64□□□□□ -2.31
CD44P16070 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
CD44P16070 MIR7111-201ENST00000619751 72 ntBASIC0.63□□□□□ -2.31
CD44P16070 Y_RNA.434-201ENST00000384090 100 ntBASIC0.62□□□□□ -2.31
CD44P16070 MIR204-201ENST00000385200 110 ntBASIC0.62□□□□□ -2.31
CD44P16070 MIR4714-201ENST00000580728 77 ntBASIC0.61□□□□□ -2.31
CD44P16070 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CD44P16070 AL500527.2-201ENST00000454105 95 ntBASIC0.6□□□□□ -2.31
CD44P16070 RNU6-1024P-201ENST00000384199 107 ntBASIC0.58□□□□□ -2.32
CD44P16070 MIR6515-201ENST00000619843 57 ntBASIC0.58□□□□□ -2.32
CD44P16070 RNU6-79P-201ENST00000362511 107 ntBASIC0.57□□□□□ -2.32
CD44P16070 SNORD114-5-201ENST00000362928 70 ntBASIC0.56□□□□□ -2.32
CD44P16070 RNA5SP214-201ENST00000363378 118 ntBASIC0.56□□□□□ -2.32
CD44P16070 SNORA62.5-201ENST00000516634 120 ntBASIC0.55□□□□□ -2.32
CD44P16070 MIR6788-201ENST00000618842 66 ntBASIC0.55□□□□□ -2.32
CD44P16070 MIR489-201ENST00000384923 84 ntBASIC0.54□□□□□ -2.32
CD44P16070 MIR598-201ENST00000384868 97 ntBASIC0.52□□□□□ -2.33
CD44P16070 Z95118.1-201ENST00000421372 247 ntBASIC0.52□□□□□ -2.33
CD44P16070 MIR4263-201ENST00000584745 83 ntBASIC0.52□□□□□ -2.33
CD44P16070 SNORD19B.1-201ENST00000630615 80 ntBASIC0.52□□□□□ -2.33
CD44P16070 MIR5000-201ENST00000577717 103 ntBASIC0.51□□□□□ -2.33
CD44P16070 SNORD114-9-201ENST00000364370 72 ntBASIC0.49□□□□□ -2.33
CD44P16070 RNA5SP480-201ENST00000516840 109 ntBASIC0.48□□□□□ -2.33
CD44P16070 AC022709.1-201ENST00000615967 87 ntBASIC0.48□□□□□ -2.33
CD44P16070 Y_RNA.349-201ENST00000365406 102 ntBASIC0.47□□□□□ -2.33
CD44P16070 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.47□□□□□ -2.33
CD44P16070 MIR548H1-201ENST00000408610 102 ntBASIC0.45□□□□□ -2.34
CD44P16070 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
CD44P16070 MIR6818-201ENST00000621576 65 ntBASIC0.45□□□□□ -2.34
CD44P16070 RNU6-1043P-201ENST00000410355 99 ntBASIC0.43□□□□□ -2.34
CD44P16070 RNA5SP347-201ENST00000362445 119 ntBASIC0.42□□□□□ -2.34
CD44P16070 SNORD114-26-201ENST00000363543 72 ntBASIC0.42□□□□□ -2.34
CD44P16070 AC104692.1-201ENST00000472406 90 ntBASIC0.42□□□□□ -2.34
CD44P16070 RNU6-164P-201ENST00000364604 103 ntBASIC0.41□□□□□ -2.34
CD44P16070 RN7SL793P-201ENST00000583259 296 ntBASIC0.41□□□□□ -2.34
CD44P16070 SNORD114-11-201ENST00000363738 75 ntBASIC0.4□□□□□ -2.35
CD44P16070 RNU6-1034P-201ENST00000365335 101 ntBASIC0.39□□□□□ -2.35
CD44P16070 SNORD114-12-201ENST00000365400 75 ntBASIC0.39□□□□□ -2.35
CD44P16070 PVT1_3.1-201ENST00000620853 95 ntBASIC0.39□□□□□ -2.35
CD44P16070 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.39□□□□□ -2.35
CD44P16070 SNORD114-23-201ENST00000363536 72 ntBASIC0.38□□□□□ -2.35
CD44P16070 MIR193B-201ENST00000384907 83 ntBASIC0.38□□□□□ -2.35
CD44P16070 MIR147A-201ENST00000385079 72 ntBASIC0.38□□□□□ -2.35
CD44P16070 RNA5SP134-201ENST00000516492 96 ntBASIC0.38□□□□□ -2.35
CD44P16070 MIR6513-201ENST00000621188 64 ntBASIC0.37□□□□□ -2.35
CD44P16070 SNORD113-3-201ENST00000364830 72 ntBASIC0.36□□□□□ -2.35
CD44P16070 MIR6779-201ENST00000617283 64 ntBASIC0.36□□□□□ -2.35
CD44P16070 RNU6-854P-201ENST00000364036 107 ntBASIC0.35□□□□□ -2.35
CD44P16070 RNU6-431P-201ENST00000383874 107 ntBASIC0.35□□□□□ -2.35
CD44P16070 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
CD44P16070 RNA5SP193-201ENST00000410353 107 ntBASIC0.35□□□□□ -2.35
CD44P16070 MIR1273G-201ENST00000577677 100 ntBASIC0.35□□□□□ -2.35
CD44P16070 MIR3666-201ENST00000607845 111 ntBASIC0.35□□□□□ -2.35
CD44P16070 MIR4788-201ENST00000639104 80 ntBASIC0.35□□□□□ -2.35
CD44P16070 RNA5SP436-201ENST00000516020 115 ntBASIC0.34□□□□□ -2.36
CD44P16070 AC010487.4-201ENST00000637027 61 ntBASIC0.34□□□□□ -2.36
CD44P16070 SNORA18.1-201ENST00000363418 128 ntBASIC0.33□□□□□ -2.36
CD44P16070 RNU6-422P-201ENST00000384632 107 ntBASIC0.33□□□□□ -2.36
CD44P16070 AC021146.6-201ENST00000514659 117 ntBASIC0.33□□□□□ -2.36
CD44P16070 Y_RNA.484-201ENST00000384389 103 ntBASIC0.32□□□□□ -2.36
CD44P16070 MIR936-201ENST00000401264 98 ntBASIC0.32□□□□□ -2.36
CD44P16070 MIR4711-201ENST00000578274 70 ntBASIC0.32□□□□□ -2.36
CD44P16070 Y_RNA.59-201ENST00000362828 102 ntBASIC0.31□□□□□ -2.36
CD44P16070 MIR924-201ENST00000638017 53 ntBASIC0.31□□□□□ -2.36
CD44P16070 Y_RNA.540-201ENST00000384638 111 ntBASIC0.28□□□□□ -2.36
CD44P16070 SNORD64-201ENST00000386683 67 ntBASIC0.28□□□□□ -2.36
CD44P16070 VTRNA1-3-201ENST00000365645 89 ntBASIC0.27□□□□□ -2.37
CD44P16070 MIR4290-201ENST00000583807 95 ntBASIC0.27□□□□□ -2.37
CD44P16070 Y_RNA.449-201ENST00000384187 102 ntBASIC0.26□□□□□ -2.37
CD44P16070 snoU13.10-201ENST00000459301 103 ntBASIC0.25□□□□□ -2.37
CD44P16070 Y_RNA.115-201ENST00000363272 98 ntBASIC0.24□□□□□ -2.37
CD44P16070 RNA5SP300-201ENST00000391197 107 ntBASIC0.24□□□□□ -2.37
CD44P16070 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
CD44P16070 MIR8087-201ENST00000612745 78 ntBASIC0.24□□□□□ -2.37
CD44P16070 MIR548W-201ENST00000581970 74 ntBASIC0.23□□□□□ -2.37
CD44P16070 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.23□□□□□ -2.37
CD44P16070 RNA5SP457-201ENST00000363657 124 ntBASIC0.21□□□□□ -2.38
CD44P16070 MIR330-201ENST00000362196 94 ntBASIC0.2□□□□□ -2.38
CD44P16070 Y_RNA.63-201ENST00000362841 102 ntBASIC0.2□□□□□ -2.38
CD44P16070 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
CD44P16070 RNU7-134P-201ENST00000458997 64 ntBASIC0.2□□□□□ -2.38
CD44P16070 ULK3-223ENST00000631115 126 ntTSL 5 BASIC0.2□□□□□ -2.38
CD44P16070 RNU6-400P-201ENST00000391173 106 ntBASIC0.19□□□□□ -2.38
CD44P16070 RNA5SP330-201ENST00000517096 96 ntBASIC0.19□□□□□ -2.38
CD44P16070 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
CD44P16070 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
CD44P16070 MIR6874-201ENST00000635894 71 ntBASIC0.19□□□□□ -2.38
CD44P16070 MIR1295B-201ENST00000636144 60 ntBASIC0.19□□□□□ -2.38
CD44P16070 SNORD4A-201ENST00000459174 72 ntBASIC0.18□□□□□ -2.38
CD44P16070 RNU6-983P-201ENST00000516004 103 ntBASIC0.18□□□□□ -2.38
CD44P16070 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
CD44P16070 Y_RNA.30-201ENST00000362572 97 ntBASIC0.16□□□□□ -2.38
CD44P16070 MIR382-201ENST00000637119 76 ntBASIC0.16□□□□□ -2.38
CD44P16070 RNU6-627P-201ENST00000364032 102 ntBASIC0.15□□□□□ -2.39
CD44P16070 MIR3123-201ENST00000583417 75 ntBASIC0.15□□□□□ -2.39
CD44P16070 AC091912.2-201ENST00000624798 167 ntBASIC0.15□□□□□ -2.39
CD44P16070 RNA5SP63-201ENST00000391225 112 ntBASIC0.14□□□□□ -2.39
CD44P16070 snoU83B.1-201ENST00000517136 88 ntBASIC0.14□□□□□ -2.39
CD44P16070 RNA5SP257-201ENST00000363023 116 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms