Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 Y_RNA.134-201ENST00000363435 105 ntBASIC0.4□□□□□ -2.35
NPM3O75607 MIR8087-201ENST00000612745 78 ntBASIC0.4□□□□□ -2.35
NPM3O75607 Y_RNA.223-201ENST00000364290 113 ntBASIC0.39□□□□□ -2.35
NPM3O75607 SNORA32.1-201ENST00000364514 115 ntBASIC0.38□□□□□ -2.35
NPM3O75607 MIR379-201ENST00000362218 67 ntBASIC0.36□□□□□ -2.35
NPM3O75607 SNORD114-12-201ENST00000365400 75 ntBASIC0.36□□□□□ -2.35
NPM3O75607 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.36□□□□□ -2.35
NPM3O75607 AC023932.2-201ENST00000603176 175 ntBASIC0.35□□□□□ -2.35
NPM3O75607 SNORA18.1-201ENST00000363418 128 ntBASIC0.34□□□□□ -2.36
NPM3O75607 MIR1295B-201ENST00000636144 60 ntBASIC0.34□□□□□ -2.36
NPM3O75607 AC120024.2-201ENST00000576526 175 ntBASIC0.33□□□□□ -2.36
NPM3O75607 U6.97-201ENST00000636904 101 ntBASIC0.33□□□□□ -2.36
NPM3O75607 Y_RNA.115-201ENST00000363272 98 ntBASIC0.32□□□□□ -2.36
NPM3O75607 Y_RNA.320-201ENST00000365144 102 ntBASIC0.32□□□□□ -2.36
NPM3O75607 AC090616.4-201ENST00000448026 115 ntBASIC0.32□□□□□ -2.36
NPM3O75607 MIR581-201ENST00000384895 96 ntBASIC0.31□□□□□ -2.36
NPM3O75607 MIR3666-201ENST00000607845 111 ntBASIC0.31□□□□□ -2.36
NPM3O75607 MIR1197-201ENST00000408818 88 ntBASIC0.28□□□□□ -2.36
NPM3O75607 Y_RNA.781-201ENST00000620301 103 ntBASIC0.28□□□□□ -2.36
NPM3O75607 SNORD18C-201ENST00000362704 69 ntBASIC0.27□□□□□ -2.37
NPM3O75607 MIR4514-201ENST00000581410 57 ntBASIC0.27□□□□□ -2.37
NPM3O75607 MIR2909-201ENST00000617113 69 ntBASIC0.27□□□□□ -2.37
NPM3O75607 SNORA62.5-201ENST00000516634 120 ntBASIC0.26□□□□□ -2.37
NPM3O75607 MIR4290-201ENST00000583807 95 ntBASIC0.26□□□□□ -2.37
NPM3O75607 MIR6718-201ENST00000616153 80 ntBASIC0.26□□□□□ -2.37
NPM3O75607 RNA5SP63-201ENST00000391225 112 ntBASIC0.24□□□□□ -2.37
NPM3O75607 RNA5SP67-201ENST00000516422 131 ntBASIC0.24□□□□□ -2.37
NPM3O75607 RNU6-68P-201ENST00000516576 104 ntBASIC0.22□□□□□ -2.37
NPM3O75607 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
NPM3O75607 MIR4788-201ENST00000639104 80 ntBASIC0.22□□□□□ -2.37
NPM3O75607 RNU6-836P-201ENST00000362920 107 ntBASIC0.21□□□□□ -2.38
NPM3O75607 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
NPM3O75607 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
NPM3O75607 MIR4645-201ENST00000583158 77 ntBASIC0.2□□□□□ -2.38
NPM3O75607 RNU6-563P-201ENST00000364872 108 ntBASIC0.19□□□□□ -2.38
NPM3O75607 RNA5SP257-201ENST00000363023 116 ntBASIC0.18□□□□□ -2.38
NPM3O75607 AC021146.6-201ENST00000514659 117 ntBASIC0.18□□□□□ -2.38
NPM3O75607 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.16□□□□□ -2.38
NPM3O75607 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
NPM3O75607 RNA5SP26-201ENST00000362406 119 ntBASIC0.14□□□□□ -2.39
NPM3O75607 Y_RNA.30-201ENST00000362572 97 ntBASIC0.14□□□□□ -2.39
NPM3O75607 SNORD4A-201ENST00000459174 72 ntBASIC0.12□□□□□ -2.39
NPM3O75607 Y_RNA.374-201ENST00000365606 101 ntBASIC0.11□□□□□ -2.39
NPM3O75607 RNU6-695P-201ENST00000391157 104 ntBASIC0.11□□□□□ -2.39
NPM3O75607 RNA5SP300-201ENST00000391197 107 ntBASIC0.1□□□□□ -2.39
NPM3O75607 SNORD114-11-201ENST00000363738 75 ntBASIC0.09□□□□□ -2.4
NPM3O75607 MIR5190-201ENST00000581537 80 ntBASIC0.09□□□□□ -2.4
NPM3O75607 Y_RNA.519-201ENST00000384553 102 ntBASIC0.08□□□□□ -2.4
NPM3O75607 MIR548AJ2-201ENST00000408539 92 ntBASIC0.07□□□□□ -2.4
NPM3O75607 AC018880.2-201ENST00000414265 201 ntBASIC0.07□□□□□ -2.4
NPM3O75607 Y_RNA.260-201ENST00000364628 101 ntBASIC0.05□□□□□ -2.4
NPM3O75607 Y_RNA.484-201ENST00000384389 103 ntBASIC0.04□□□□□ -2.4
NPM3O75607 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
NPM3O75607 RNU6-1091P-201ENST00000363945 107 ntBASIC0.03□□□□□ -2.4
NPM3O75607 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.03□□□□□ -2.4
NPM3O75607 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
NPM3O75607 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
NPM3O75607 RNA5SP224-201ENST00000365069 126 ntBASIC0□□□□□ -2.41
NPM3O75607 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
NPM3O75607 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
NPM3O75607 Y_RNA.335-201ENST00000365299 96 ntBASIC-0.06□□□□□ -2.42
NPM3O75607 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.07□□□□□ -2.42
NPM3O75607 MIR147A-201ENST00000385079 72 ntBASIC-0.09□□□□□ -2.42
NPM3O75607 FTX_4.1-201ENST00000616291 147 ntBASIC-0.09□□□□□ -2.42
NPM3O75607 RNA5SP285-201ENST00000516619 119 ntBASIC-0.11□□□□□ -2.43
NPM3O75607 RNU6-912P-201ENST00000363800 104 ntBASIC-0.12□□□□□ -2.43
NPM3O75607 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.13□□□□□ -2.43
NPM3O75607 MIR6759-201ENST00000638110 65 ntBASIC-0.14□□□□□ -2.43
NPM3O75607 MIR6818-201ENST00000621576 65 ntBASIC-0.15□□□□□ -2.43
NPM3O75607 SNORD45C-201ENST00000383893 79 ntBASIC-0.17□□□□□ -2.44
NPM3O75607 RNU6-79P-201ENST00000362511 107 ntBASIC-0.2□□□□□ -2.44
NPM3O75607 RNU6-164P-201ENST00000364604 103 ntBASIC-0.2□□□□□ -2.44
NPM3O75607 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.21□□□□□ -2.44
NPM3O75607 RNU6-431P-201ENST00000383874 107 ntBASIC-0.21□□□□□ -2.44
NPM3O75607 Y_RNA.406-201ENST00000383984 100 ntBASIC-0.21□□□□□ -2.44
NPM3O75607 Z95118.1-201ENST00000421372 247 ntBASIC-0.21□□□□□ -2.44
NPM3O75607 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.22□□□□□ -2.44
NPM3O75607 SNORA3B-201ENST00000391305 131 ntBASIC-0.25□□□□□ -2.45
NPM3O75607 SNORD64-201ENST00000386683 67 ntBASIC-0.26□□□□□ -2.45
NPM3O75607 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
NPM3O75607 MIR214-201ENST00000385214 110 ntBASIC-0.28□□□□□ -2.45
NPM3O75607 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.28□□□□□ -2.45
NPM3O75607 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.28□□□□□ -2.45
NPM3O75607 SNORD114-14-201ENST00000362723 75 ntBASIC-0.29□□□□□ -2.46
NPM3O75607 snoU83B.1-201ENST00000517136 88 ntBASIC-0.29□□□□□ -2.46
NPM3O75607 SNORD114-31-201ENST00000363219 75 ntBASIC-0.32□□□□□ -2.46
NPM3O75607 IGLVI-20-201ENST00000519296 130 ntBASIC-0.32□□□□□ -2.46
NPM3O75607 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.34□□□□□ -2.46
NPM3O75607 AL500527.2-201ENST00000454105 95 ntBASIC-0.34□□□□□ -2.46
NPM3O75607 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.35□□□□□ -2.47
NPM3O75607 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.36□□□□□ -2.47
NPM3O75607 RNU6-345P-201ENST00000517001 107 ntBASIC-0.36□□□□□ -2.47
NPM3O75607 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.37□□□□□ -2.47
NPM3O75607 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.37□□□□□ -2.47
NPM3O75607 MIR656-201ENST00000385224 78 ntBASIC-0.38□□□□□ -2.47
NPM3O75607 SNORD114-28-201ENST00000363610 72 ntBASIC-0.41□□□□□ -2.48
NPM3O75607 RNU6-320P-201ENST00000516511 106 ntBASIC-0.41□□□□□ -2.48
NPM3O75607 MIR382-201ENST00000637119 76 ntBASIC-0.41□□□□□ -2.48
NPM3O75607 SNORD14C-201ENST00000365382 88 ntBASIC-0.42□□□□□ -2.48
NPM3O75607 MIR5589-201ENST00000579442 60 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 284.4 ms